Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00214 ATGTGCTTGCAAACGGTGGCGCATCCACGGGGTTCAAGCGAGTTCGGCAGGTTCACGTTGCGGCATGGCACCACAAGCGGCGGCGACGAAGAGGACACGCAAGGCCAAGATGGCATCTCGGGGCTAGCGCCGTCACTGGGATTCGAGCAACTTTTGCAGCAAGGTTCCGGACAGAGGGAGAACGAAAGGGTCCAAGGAAGTGGTTTTCCTATGACGTCAAGCTTTGGCCATCTTTCTTCTCCTAGTTTGTCTTGTTATTCCCCCAATTCAGCCTCTGTTTTGGAATCTGCCTCTGCTTCTGGTTCTTGGATTGGCCAGAAAAGAGTCCGTGAAGAAGAAAGCGATGCTTCTCAGCTCATAGAACCAGCTCCTAGACTCTATAGAGCTGTAGGTGACTTCAGAGTGCCTCAACCGGGAGAGTCTTCATCAGTAACAGAAGCAGCTACAACTATGGCCACCACGGGCGCCACTGCTGCTCTGAAGTCGTCAAGTGAAAGTGGTTCATACGAAGAAAGTGGtgagaggagaagaagataCAGAGGAGTGAGGCAGAGGCCATGGGGGAAATGGGCAGCTGAAATTCGTGATCCTCATAAAGCTGCTAGAGTTTGGCTTGGCACATTTGAAACAGCTGAGGCAGCAGCGAGAGCTTACGATGAAGCTGCATTGAGATTTAGAGGCAACAGAGCAAAACTTAATTTTCCAGAAAATGTTACAGTAGTACcacaagttcaaaattttccgGCAACCCGATTGGCCATTTCGGATTCTCCGGTGACCCATTTACTATCAAGGCCAATTCCGCAGCCTCCATTGCAGTCAGCATTAATGCAGGCACAAGCACTTCAGGGAAACTCTGGTTTGATCAGAGACTACTGGGGTAACTCTCAATTGCCGCCGAGCTACGGTGACTTCCATGGCCAACAACTACAGCAACATTCGAGTTCCCTTGAGCAATGGTTCTATAATTCACAATTGGCTGCTCTTCAATCATCATTATCATCCTCACCATCTTTGTCTTCTTCGTCACTATCATCATTTTCACCTTCAACTCAAATATCCTCTGCTTCATTTCCTCTGTTTTCTAGTCCGCAAATGCGTATTTTCGGGCCACCGTGGAACGAGAACCAGAGCCAGAGTAGTGGATCGAATTTTCCGGCTTCAACTTGGTCAAATACTGGTGGCTATCCTCCCCCATCTGGCTG 1205 0.4797 MCLQTVAHPRGSSEFGRFTLRHGTTSGGDEEDTQGQDGISGLAPSLGFEQLLQQGSGQRENERVQGSGFPMTSSFGHLSSPSLSCYSPNSASVLESASASGSWIGQKRVREEESDASQLIEPAPRLYRAVGDFRVPQPGESSSVTEAATTMATTGATAALKSSSESGSYEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVTVVPQVQNFPATRLAISDSPVTHLLSRPIPQPPLQSALMQAQALQGNSGLIRDYWGNSQLPPSYGDFHGQQLQQHSSSLEQWFYNSQLAALQSSLSSSPSLSSSSLSSFSPSTQISSASFPLFSSPQMRIFGPPWNENQSQSSGSNFPASTWSNTGGYPPPSG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00214 401 MobiDBLite consensus disorder prediction 1 40 - -
Bva04g00214 401 MobiDBLite consensus disorder prediction 153 167 - -
Bva04g00214 401 PRINTS Ethylene responsive element binding protein signature 201 217 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 PRINTS Ethylene responsive element binding protein signature 179 190 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 SMART rav1_2 178 241 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 54 378 - -
Bva04g00214 401 SUPERFAMILY DNA-binding domain 178 236 IPR016177 GO:0003677
Bva04g00214 401 CDD AP2 186 237 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 MobiDBLite consensus disorder prediction 153 180 - -
Bva04g00214 401 ProSiteProfiles AP2/ERF domain profile. 178 235 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 MobiDBLite consensus disorder prediction 368 401 - -
Bva04g00214 401 PANTHER DNA-BINDING DOMAIN 54 378 IPR044808 GO:0003700|GO:0009873
Bva04g00214 401 MobiDBLite consensus disorder prediction 369 401 - -
Bva04g00214 401 Pfam AP2 domain 178 227 IPR001471 GO:0003700|GO:0006355
Bva04g00214 401 Gene3D AP2/ERF domain 177 237 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00214 Bva-Chr4 1321967 1324100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00214 170 250 AP2-EREBP Transcription Factor Family AT2G33710 71.951 3.31e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g00214 AP2 4.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00214 - - gmx:100804843 270.396