Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00210 ATGTGCGTGCGCCTGGCTCCACCCCGACACAAGAGTACACAAGACAACCTAAGCATGGCACCCAGTGGGGCACGTTGGGTTCcaatcattttcatcatcattaACATTCATTGTCTTGTTGTTCCCTCTTTCGGGGCTTCCGAGTCTGAACTGCTCTTCAAGGTCAAGGAATCCATTGAGGACAACAATGCATTATTGTCTTGGAACTCATCAACTCCTCCTTGCGATGGTGAACATTCTAATTGGATTGGTATTGTGTGTTATGCCGGAAAAGTATGGGGATTGAAACTTGAGAATATGGGGCTCAAAGGGGCCATTGATGTCCATTCCTTAAAAGAGTTAACGAATCTCAGAACGTTAAGCATCAAGAATAACAATTTTGAGGGCAGTTGGCCAGATTTCAACCTACTAGTTGGTCTCAAGGGCCTTTACATTTCGAATAATAAGTTCAGTGGCGAGATTCCTGCGCCATCTTTTCAGGGAATGCAGTGGTTGAAGAAACTTGATTTGTCCAATAATCAATTTAGCTCTTCTATTCCAACTTCCCTCATCTTATTGCCTAGGCTTATGACGTTGAGGTTGGATGGCAACAAATTCACTGGCACCATTCCACATTTCCAACAGAAAACTTTGAAATCCTTAAACGTAGCTAACAATCAGTTGCATGGCCAAATACCACCCACCCTTAGTCACATGCCTGCCTCATCGTTTGCTGGTAATGGAGGCCTATGCGGAGCACCATTGGAAGCATGCCAATCGAACAAACCCTCAACTATCAGTGTTATTGTGGTTGCAGTAGTTGTTGGTGTTGCAGTGATCATTGTGATCGGAGTAGTGATCTTCATGCTTAATAGAAGAAAACGACATCCAACGGCGCCGGTGGAGAATCCGACATTGACTCCTCCAAAGAAAGGCGCTTGCAGAGATTCCGATGATGGTAGTGTACGGTCAACAAGTTCTCACGTATCAACAGGCAGCAGAAGGGGAGACAACATGAAGTTAACATTTATAAAAGATGACACAGAGAGATTTGATTTGACAGAGTTGCTAAGATCCTCAGCTGAATTACTGGGCAGTGGTTGCTTCAGTTCTTCCTACAAGGCTGCTATGGTGAATGGTCCAAAGATGGTTGTCAAGAGATTCAAAGCAATGAACAACGTAGGAAGGGAAGAGTTCCAGGAACATATGAGGAGAATAGGAAGGTTGAAACATCAAAACTTACTTCCTCTTGTGGCATACTATTATAGAAGGGAGGAGAAGCTCTTGGTTACAGATTTTGTTGATAATGGCAGCTTGGCTATTAGGCTTCATGGGCATCAAGGTCTAGGGCAGCCAAGCCTTGATTGGCCAACCAGGTTGAAGATTATTAAAGGCATAGCAAAGGGTCTTGAGTATCTCTACAAAGAGATGCCAAGCCTAATTGCACCTCATGGACATCTCAAATCCTCAAATGTTCTTCTCACTGAATCTTTCGAGCCCCTACTTAACGATTACGGTTTAGCTCCAGTAATCAACCAGGAGCTTGCTCATGACATCATGGTGGTCTATAAATCCCCCGAGTACATCCAACAGGGAagaattacaaagaaaaccGATGTTTGGAGTCTTGGAATATTAATCCTAGAGACTTTAACTGGGAAAATCCCAGCTAACTTCCTATACCAAGGTAAAGCAAGCAAGGAGGATTTGGCCAAGTGGGTTGAATCAGTTGTCCCAGAAGAGTGGACAAGTGAAGTGTTTGACAAAGAAATGGGATCAACCAAGAACAGTGAAGGAGAGATAGTGAAACTCTTGAAGATTGGGTTGGCTTGTTGCGAAGCAGATATGGACAAGAGGTGGGATTTAAAAGAAGCCATTGAGAAAATTCAAGAGGTGAAAGAGAGGGATCATGATGATGCATG 1901 0.4303 MCVRLAPPRHKSTQDNLSMAPSGARWVPIIFIIINIHCLVVPSFGASESELLFKVKESIEDNNALLSWNSSTPPCDGEHSNWIGIVCYAGKVWGLKLENMGLKGAIDVHSLKELTNLRTLSIKNNNFEGSWPDFNLLVGLKGLYISNNKFSGEIPAPSFQGMQWLKKLDLSNNQFSSSIPTSLILLPRLMTLRLDGNKFTGTIPHFQQKTLKSLNVANNQLHGQIPPTLSHMPASSFAGNGGLCGAPLEACQSNKPSTISVIVVAVVVGVAVIIVIGVVIFMLNRRKRHPTAPVENPTLTPPKKGACRDSDDGSVRSTSSHVSTGSRRGDNMKLTFIKDDTERFDLTELLRSSAELLGSGCFSSSYKAAMVNGPKMVVKRFKAMNNVGREEFQEHMRRIGRLKHQNLLPLVAYYYRREEKLLVTDFVDNGSLAIRLHGHQGLGQPSLDWPTRLKIIKGIAKGLEYLYKEMPSLIAPHGHLKSSNVLLTESFEPLLNDYGLAPVINQELAHDIMVVYKSPEYIQQGRITKKTDVWSLGILILETLTGKIPANFLYQGKASKEDLAKWVESVVPEEWTSEVFDKEMGSTKNSEGEIVKLLKIGLACCEADMDKRWDLKEAIEKIQEVKERDHDDA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00210 633 SUPERFAMILY L domain-like 66 232 - -
Bva04g00210 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 632 - -
Bva04g00210 633 ProSiteProfiles Protein kinase domain profile. 351 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00210 633 Gene3D Ribonuclease Inhibitor 47 158 IPR032675 -
Bva04g00210 633 Gene3D Ribonuclease Inhibitor 159 207 IPR032675 -
Bva04g00210 633 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00210 633 PANTHER LRR RECEPTOR-LIKE KINASE 26 632 - -
Bva04g00210 633 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Bva04g00210 633 Gene3D Transferase(Phosphotransferase) domain 1 427 633 - -
Bva04g00210 633 SUPERFAMILY Protein kinase-like (PK-like) 354 623 IPR011009 -
Bva04g00210 633 Gene3D Ribonuclease Inhibitor 209 251 IPR032675 -
Bva04g00210 633 Pfam Leucine rich repeat N-terminal domain 47 87 IPR013210 -
Bva04g00210 633 Gene3D Phosphorylase Kinase; domain 1 314 426 - -
Bva04g00210 633 MobiDBLite consensus disorder prediction 290 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00210 Bva-Chr4 1277190 1280653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00210 19 632 Receptor kinase-like Gene Family AT5G35390 52.248 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva04g00210 Pkinase 4.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00210 - - gmx:100804368 828.935