Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00207 ATGTTTGGTAATGATTACAAGTCACAATACATAGACGGCCAGAAGGAGAAATTTGTAAGGTTGGATGACCTGGATTCTAACATGTCGACGCCATATAGAACAAGGAAGAtgaggatgaagatgaagaagatgaggTTTAATTTAGGTCACCTGGCCACGAGGCTAGGAATTGAGAAGGGATCAGGTGGACTACTAACATTTGGTAGATCTCTGGGAAGTGGGGTGACCAGGGCAGTGTTCCCAGAAGAGCTTAAAGTGGCtgagaaaatgattttcaacCCACAAGACAAGAAACTTACGAAATGGTATAAGGTTTTTGAGCTGATATGCATTGCTTCAATATCTTGTGATCCTCTCTTCTTTTATCTTCCTATCTTCAATAAATTCTATTGTATCGGCATAGACACAAGTCTAGCATTTACTGCTGTCACACTGAGAACTGTGTTTGATTCTATCTATATCCTCCGAATGGTTTTTCAATTCCGCACTGCTTTTATTGCACCTTCATCAAGGGTTTTTGGACGAGGTGAACTTGTTATAGATCCTGCACAGATTGCCTCCAGATATCTATCACGTTACTTCATGATCGACTTCATTTCTGTGCTCCCCATGCCACAGATTATTGTGTGGAAATTTcttaagagaagaaaaggttCAGAGTTATTGGCCACAAAGACGTCATTGCTAACAGTTATCATTCTCCAATATATCCCAAGATTTGCACGCTTTTATCCTTTAAGCTCAGACATTAAAAAGAGTGCTGGTGGGATGTCTGATAATGCACTTTTGGGTGCCTTACACGATGTGTTATGGCTCATTCTTGCCAGCCATATAACGGGGTCTGTGTGGTACTTGCTAGCCATAGAACGTTGTACCACATGCTGGCAGTTGGCTTGTCATAGTTCTCCGCAATGTGACATGAATTTCTTGGTATGTGGGAATAAGCGTTTGGCAGGTTATGATGTCTGGAGTCGTATCAGCGGCAAAATTCTTAAGGAGCGTTGCGCTATTAATGAGGATGATATCTCAGCATATGATTATGGGATCTTTTCCCAAGCCATAAAAACTGGGATTGTTGCAACCAGAGATTTCTTTACCAAATTATGTTACTGTCTCTGGTGGGGCCTACAAAACTTGAGTACACTTGGTCAGGGGCTTACAACCAGTACCTATCCTGGAGAGATTCTGTTTTCCATAGCAATCTCTATTACGGGGCTTATTCTTTTTGCTCTTCTGATTGGAAACATCCAGACTTACCTTCAATCAATGACTGTTCGTCTTGATGAAATGAGGATTAAAAGGCATGACTCTGAGCAGTGGATGCATCATCGCTTGCTTCCACAAGAACTAAGGGACAAAGTGAGACAGTACAATCAATACAAGTGGATGCAAACAAGAGGAGTAGATGAAGAGAACTTGGTTCAGAATCTTCCAAAAGATCTTAGGAGGGATATCAAACGGCATCTTTGTTTGAATTTGGTCAGAAGGGTTCCTCTCTTTGCTAATATGGACGAGCGCTTGCTGGATGCAATCTGTGAGCGGTTGAAGCCTACTTTATACCCTGAGAGTGTATACGTAGTTCGCGAAGGGGATCCAGTTAATGAGATGCTCTTCATCATACGTGGGAAGCTAGAGAGTGTCACTACAGATGGCGGAAGAAGTGGATTTTTCAACAGAGGCATTCTCAAAGAAGGTGACTTCTGTGGAGACGAGTTGTTAACTTGGGCATTGGACCCAAAATCTTCATCAAACTTGCCATCATCCACTCGGACAGTGATGGCTATAAGTGAAGTGGAAGCATTTGCTTTGGAAGCGGAGGAGTTGAAATTTGTTGCATCCCAGTTTAGGCGCCTCCACAGCAGACAGGTCCAGCAAACCTTCCGTTTCTACTCTCAACAGTGGAGAACATGGGCTGCTCGCTTAATTCAATCGGCATGGAGGCGATATTCTAAGAGGAAAATTGCAGAAATGAGGcgaagggaagaagaagaagaatgggaagaagaagaagaagaagaagaagacgcACCCGTATATGAATCTGACGATGAAAAAAGACCCTTAGTTGCGGCTAGTGTCACTGCATCTGGGTCTGGTCTGGGGTCAGCCATGTACGCTTCGCGCTTTGCTGCTAGTGCTCAGAAGCCTCACACTACAAGTTCCAAGAGCTTGGGGAAAATCCAAAAGCCCCAGGAACCTGACTTTAGTGAGTATTATGGAGAATG 2225 0.4117 MFGNDYKSQYIDGQKEKFVRLDDLDSNMSTPYRTRKMRMKMKKMRFNLGHLATRLGIEKGSGGLLTFGRSLGSGVTRAVFPEELKVAEKMIFNPQDKKLTKWYKVFELICIASISCDPLFFYLPIFNKFYCIGIDTSLAFTAVTLRTVFDSIYILRMVFQFRTAFIAPSSRVFGRGELVIDPAQIASRYLSRYFMIDFISVLPMPQIIVWKFLKRRKGSELLATKTSLLTVIILQYIPRFARFYPLSSDIKKSAGGMSDNALLGALHDVLWLILASHITGSVWYLLAIERCTTCWQLACHSSPQCDMNFLVCGNKRLAGYDVWSRISGKILKERCAINEDDISAYDYGIFSQAIKTGIVATRDFFTKLCYCLWWGLQNLSTLGQGLTTSTYPGEILFSIAISITGLILFALLIGNIQTYLQSMTVRLDEMRIKRHDSEQWMHHRLLPQELRDKVRQYNQYKWMQTRGVDEENLVQNLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPTLYPESVYVVREGDPVNEMLFIIRGKLESVTTDGGRSGFFNRGILKEGDFCGDELLTWALDPKSSSNLPSSTRTVMAISEVEAFALEAEELKFVASQFRRLHSRQVQQTFRFYSQQWRTWAARLIQSAWRRYSKRKIAEMRRREEEEEWEEEEEEEEDAPVYESDDEKRPLVAASVTASGSGLGSAMYASRFAASAQKPHTTSSKSLGKIQKPQEPDFSEYYGE 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00207 741 Gene3D Jelly Rolls 497 617 IPR014710 -
Bva04g00207 741 Coils Coil 652 674 - -
Bva04g00207 741 SUPERFAMILY cAMP-binding domain-like 429 619 IPR018490 -
Bva04g00207 741 Pfam Ion transport protein 103 426 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva04g00207 741 Gene3D - 104 423 - -
Bva04g00207 741 MobiDBLite consensus disorder prediction 662 679 - -
Bva04g00207 741 CDD CAP_ED 499 630 IPR000595 -
Bva04g00207 741 SUPERFAMILY Voltage-gated potassium channels 94 421 - -
Bva04g00207 741 Gene3D Helix hairpin bin 424 490 - -
Bva04g00207 741 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 738 - -
Bva04g00207 741 ProSiteProfiles cAMP/cGMP binding motif profile. 499 629 IPR000595 -
Bva04g00207 741 MobiDBLite consensus disorder prediction 658 687 - -
Bva04g00207 741 ProSiteProfiles IQ motif profile. 635 664 IPR000048 GO:0005515
Bva04g00207 741 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 13 738 - -
Bva04g00207 741 SMART cnmp_10 499 630 IPR000595 -
Bva04g00207 741 Pfam Cyclic nucleotide-binding domain 520 609 IPR000595 -
Bva04g00207 741 MobiDBLite consensus disorder prediction 712 727 - -
Bva04g00207 741 MobiDBLite consensus disorder prediction 710 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00207 Bva-Chr4 1259874 1264102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00207 6 735 Ion Channels AT1G15990 64.619 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00207 K05391 - jre:109008261 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00207 04 1259874 1264102 Bva13g01915 13 15568280 15569754 BWGD