Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00205 ATGAAAGCGCCGGCCGACGGTACCGCCGGAGCTGCCTCAACGAGTCCCTGCGAAGGAGGAGAAAAGAAGCGCATAAACCCGGAGCTTTGGCAAGCTTGTGCGGGGCCACTGGTGAACCTGCCGCCGGCAGGGACTCACGTCATTTACTTCCCTCAAGGTCACAGTGAACAGGTTGCAGCATCTTTAAAGAAAGATGTGGATGCTCAGATTCCAAACTATCCGAATCTTCAGTCAAAGTTACTGTGTCTCCTTCACAATGTCGCCTTGCATGCTGACCCAGAAACAGACGAAGTATATGCACAGATGACACTCCAACCAGTGCCTTCTTACGACAAGGATGCATTATTAAGATCAGATCTTGCACTCAAATCAAATAAGCCACAACCTGAGTTCTTCTGTAAGCAACTGACAGCCAGTGATACAAGTACTCATGGAGGATTCTCTGTGCCCCGCCGAGCAGCAGAGAAGATTTTTCCCCCTCTTGATCACTCTATGCAACCGCCTGCTCAAGAGCTCATTGCAAGGGATTTGCACGACAACGTTTGGACATTCCGCCATATATATCGTGGACAACCAAAGCGTCATTTACTTACGACTGGATGGAGTCTATTTGTTAGTGGAAAGAGGCTTTTTGCTGGAGattctgttttatttataagAGATGAAAAGCAGCAACTACTTTTGGGAATCCGGCGAGCTAACAGGCAACTTACCAATATTTCATCTTCGGTACTCTCAAGTGATAGCATGCATATTGGAATTCTGGCAGCAGCAGCTCATGCTGCTGCAAACAATAGCCCATTCACTGTGTTCTATAATCCTAGGGCAAGTCCCTCAGAATTTGTTATTCCTTTGGCCAAGTACTACAAGGCTGTCTATAGCCACCAAATATCTCCTGGATTGCGCTTCCGGATGATGTTTGAAACTGAAGATTCAGGAACAAGAAGgTATATGGGTACAATTGCGGGTATCAGTGATCTGGACCCTGTGAGATGGAAAAACTCACAATGGCGTAATTTGCAGGTTGGTTGGGATGAATCAACTGCTGGGGACAAGCGCAGTAGGGTCTCAATCTGGGAAATTGAACCTGTGACAGCTCCATTTTTCATCTGCCCCCCACCATTCTTCAGATCCAAGCGACCAAGACAACCGGGAATGCCAGATGATGAACTCTCTGATTTTGATAACATTTTCAAGCGGACAATGCCTTGGCTTGGTGATGATATTTGCACAAATGATCCTCAAGCTCTCCCTGGACTAAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTGCTTTGGCCAGCACATTGCAGCCTAATTACTTGCATTCTTTGTCTGGGTCTGCTCTACAAAATCTTCCTGGTGCAGACATTGTCCGTCAGTTGGGATTTTCTGCTCCACAAATTTCTCAGTCAAACAATGCAGCCTTCAATGCTAGGCTACTTCAGACTGCACAACAGCTGGATCACCTTCAGAAGCTGCCATCCACATCTAATGTATTGGGAACAGTAATGCAGCCACAGCAACAGCTGTGTGATATCACAAAGCAGAATTTGGTGaatcaaactcctccacagaATCAAGCTCAAGCTCAACTTATGCATCCTCAAAATCTTGTTCAAACGAATAATATTCTTCAACAGCAGCAACCATCCATTCAGAACCATCAAATCCATCGAAACCTTTCTCAGAATTCACAGCAGCAACAGCAGACAATTATGGGTCAGAGTCAACAACAAAACCTGGTTCAATCTCCTATGCCTGATCAAGTTAATCAACTACAAATGTCTGATAATCAGATTCAGCTTCAATTGTTACAGAAGCTTCAACAGCAACAACAAACGCTTTTGGCACAGCAACAGACTACTCAACTTGCCCAGATCCAAGACCATCAGAGGCAGCTTTTAGATGTGGCACAAAACTTCTCTAGGTCTTCAATGCCTGGTCAAGTGCTGGAGATTCCTCCAATGCTTCAAAACTCACTCCCTGAGGCCAGCTCTACTCCACATCAGATGACAAAGATTAATGGCCAAACCAGTGTTCAGTTCTCTCATATGCCCCATCAGCCAAAGCTTCAACAGCGACTTAGCTCACTGTCTGAAATATCTGGGAACATGGGACTTCCTCCTATGCCTAACACCAACCAGCTCTCTGCTGGTGGTGGTAGCATATTGACCGGAGCAACTGAAGCAGGGCAATCCGTTATTACTGATGATGTTCCATCTTGTTCCACTTCACCTTCCACAAATAACTGTGCAAATGTACTTCAACCGGCAATGAATACCCATACTCATAGGAACACAACAGTGGGCGGTGACATGGCACAATCTGCTGCAACAATCTTGAGTCCAAGTGTTTTAGAAACCATGTCATCAAATGCAAACTTGGTGAAAGATTTACAACCGAGGTCTGAAGTTAAGCCTTCTTTGAACATTTCCAAGAGTCAAAATCAAGGAAATTTTACCCCTCAAGCATACTTGAATAGTGGGACTGCCCATACTGATTTTTTGGATACATCATCTTCCACAACTTCCGTTTGCGTCTCTCAGAATGAAACTCATGTACATCAGACTAACAATCCATTATACAATCCGCAGTCAATATTTAGAGACAATAGTCAAGATGGAGAAGTTCAGGCAGATGCTAGGAGCCACGTTACATTTTTGAATAACATTGATGGCCAATTAGGAATGCCACCAAACACAGACCCTCTTTCAACCAAAGGCACAGTTGGGCTGGGGAAGGATTTGCCAAATCACTTTCCATCAGGAAGCATGCTTGGTAATTATGAAAGTAATAGAGATGCTCAGCAGGAACTTTCATCTTCAATGGTTTCACAGACATTTGGAGTTCCTGATATGACCTTCAATTCAATTGACTCCACGATAAATGATGGCAGCTTCTTAAACAGGAGTGCATGGGCTCCACCACCTCCACCACCACAGTTTCAACGGATGAGGACATACACAAAGGTGTACAAACGTGGAGCTGTGGGAAGGTCAATAGACATAACACGATATTCAGGGTATGAAGAACTTAAACAAGATCTGGCTCGCAGATTTGGCATAGAGGGACAGTTGGAGGATCGGCAAAGAGTCGGCTGGAAACTTGTTTATGTGGATCATGAGAATGACGTTCTGTTAGTGGGAGATGACCCCTGGGAGGAGTTTGTGAACTGTGTCCGCTGCATTAAGATACTTTCTCCTCAAGAGGTGCAACAGATGAGCTTGGATGGTGATTTCGGCAATGGTGGCCTTCCAAATCAAGCCTGCAGCAGCTCTGATGACCTTTCATGTCCCGCAGCACAACTTAGGACAATCTTCTGCAGCTCTAATTTTCAAAGGAAAATGGACGCTACAATGCCTGTCTGCAAGTCTGTTAGCTCGCCTTCAGTAGGTTTATTTGTGGGGAGAACTAGAGGAATAAAGAGTTCTCAATGCAGCTTTTTAGTgggaaacaaattaaattttcctaGGCAAGGGGCTCAAAGTGCTCAGGTAAGTCGTAAACATAGAAGGCACTGTGGGGCTCTCCATGCAACATGTCAAGCTGATAAAATCCTTGTGGCAAATAGAGGGGAAATTGCTGTTCGTGTTATTAGAACTGCTCATGAAATGGGGATACCTTGTGTGGCTGTGTACTCAACCATAGACAAGGATGCACTTCATGTGAAATTGGCTGATGAAGCAGTTTGCATTGGTGAAGCACCCAGTAGTCAATCGTACTTATCAATTCCTAATGTTCTATCAGCTGCTATCAGCCGTAAATGCACAATGTTACATCCTGGATATGGTTTTCTTGCTGAAAATGCAGTATTTGTTGAAATGTGCAGAGaacataaaatcaattttattggGCCCAATCCTGATAGTATTCGGGTCATGGGTGACAAATCAACTGCCCGAGACACAATGAAGAAAGCAGGTGTTCCCACTGTTCCAGGAAGTGATGGACTTTTGAAgACCACAGATGAAGCAATCAAGCTGGCGAATGAGATTGGTTTCCCTGTGATGATCAAGGCAACAGCAGGTGGTGGAGGGCGTGGCATGCGTCTTGCCAAAGAACCTGATGAGTTTGTAAAGTTGTTACAGCAAGCTAAGAGTGAAGCGGCTGCTGCTTTTGGCAATGATGGGGTTTATTTGGAAAAGTACATCCAGAATCCCAGGCACATTGAGTTCCagGTTCTTGCTGATAAATATGGTAATGTGGTTCACTTTGGAGAACGTGATTGCAGCATCCAGAGACGAAACCAAAAACTGTTGGAAGAAGCACCTTCTCCTGCATTGACCCCAGAGTTGCGGAAGGCAATGGGTGATGCAGCAGTAGCAGCAGCTGCGTCTATAGGTTACATTGGTGTTGGAACAGTTGAATTCCTCTTGGATGAGAGAGGGTCCTTTTACTTCATGGAGATGAACACACGTATTCAGGTGGAGCATCCCGTGACAGAAATGATTTCCTCTGTTGATTTGATTGAAGAGCAAATTCGTGTAGCTTTGGGAGAAAAACTTCGACACAAACAGGAAGATATTGTGCTCAGTGGACATTCTATTGAATGCCGCATCAATGCAGAGGATGCTTTTAAGGGATTTAGACCAGGACCAGGAAGAATAACTGCATACTTGCCATCTGGAGGTCCATTTGTCAGGATGGACAGCCATGTTTATCCAGATTATGTGGTCCCTCCAAATTATGACTCTCTTCTTGGAAAGCTAATTGTGTGGGCTCCAACCAGGGAAAAAGCAATTGAACGCATGAAAAGGGCACTTGATGACACTATTATCACAGGGGTCCCTACAACAATTGATTATCATAAACTGATCCTTGACATAGAGGACTTCAGAAATGGAACGGTTGACACTGCTTTTATTCCAAAGCATGAGGAGGAATTAGCTATGCCCCCACAGAAGATGGTCTTAGTTGACAAGGCTTA 4934 0.4406 MKAPADGTAGAASTSPCEGGEKKRINPELWQACAGPLVNLPPAGTHVIYFPQGHSEQVAASLKKDVDAQIPNYPNLQSKLLCLLHNVALHADPETDEVYAQMTLQPVPSYDKDALLRSDLALKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDHSMQPPAQELIARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQLTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGLRFRMMFETEDSGTRRYMGTIAGISDLDPVRWKNSQWRNLQVGWDESTAGDKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQPGMPDDELSDFDNIFKRTMPWLGDDICTNDPQALPGLSLVQWMNMQQNPALASTLQPNYLHSLSGSALQNLPGADIVRQLGFSAPQISQSNNAAFNARLLQTAQQLDHLQKLPSTSNVLGTVMQPQQQLCDITKQNLVNQTPPQNQAQAQLMHPQNLVQTNNILQQQQPSIQNHQIHRNLSQNSQQQQQTIMGQSQQQNLVQSPMPDQVNQLQMSDNQIQLQLLQKLQQQQQTLLAQQQTTQLAQIQDHQRQLLDVAQNFSRSSMPGQVLEIPPMLQNSLPEASSTPHQMTKINGQTSVQFSHMPHQPKLQQRLSSLSEISGNMGLPPMPNTNQLSAGGGSILTGATEAGQSVITDDVPSCSTSPSTNNCANVLQPAMNTHTHRNTTVGGDMAQSAATILSPSVLETMSSNANLVKDLQPRSEVKPSLNISKSQNQGNFTPQAYLNSGTAHTDFLDTSSSTTSVCVSQNETHVHQTNNPLYNPQSIFRDNSQDGEVQADARSHVTFLNNIDGQLGMPPNTDPLSTKGTVGLGKDLPNHFPSGSMLGNYESNRDAQQELSSSMVSQTFGVPDMTFNSIDSTINDGSFLNRSAWAPPPPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLPNQACSSSDDLSCPAAQLRTIFCSSNFQRKMDATMPVCKSVSSPSVGLFVGRTRGIKSSQCSFLVGNKLNFPRQGAQSAQVSRKHRRHCGALHATCQADKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSSQSYLSIPNVLSAAISRKCTMLHPGYGFLAENAVFVEMCREHKINFIGPNPDSIRVMGDKSTARDTMKKAGVPTVPGSDGLLKTTDEAIKLANEIGFPVMIKATAGGGGRGMRLAKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCSIQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVALGEKLRHKQEDIVLSGHSIECRINAEDAFKGFRPGPGRITAYLPSGGPFVRMDSHVYPDYVVPPNYDSLLGKLIVWAPTREKAIERMKRALDDTIITGVPTTIDYHKLILDIEDFRNGTVDTAFIPKHEEELAMPPQKMVLVDKA 1644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00205 1644 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 1. 1336 1350 IPR005479 GO:0005524
Bva04g00205 1644 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 1469 1476 IPR005479 GO:0005524
Bva04g00205 1644 ProSiteProfiles PB1 domain profile. 988 1072 IPR000270 GO:0005515
Bva04g00205 1644 Gene3D - 296 367 - -
Bva04g00205 1644 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1095 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva04g00205 1644 Pfam Auxin response factor 258 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva04g00205 1644 SUPERFAMILY CAD & PB1 domains 1001 1066 - -
Bva04g00205 1644 Pfam Biotin carboxylase, N-terminal domain 1186 1293 IPR005481 -
Bva04g00205 1644 ProSiteProfiles ATP-grasp fold profile. 1303 1500 IPR011761 GO:0005524|GO:0046872
Bva04g00205 1644 SUPERFAMILY DNA-binding pseudobarrel domain 121 261 IPR015300 -
Bva04g00205 1644 Pfam AUX/IAA family 988 1073 IPR033389 -
Bva04g00205 1644 Pfam B3 DNA binding domain 132 233 IPR003340 GO:0003677
Bva04g00205 1644 SUPERFAMILY Rudiment single hybrid motif 1514 1631 IPR011054 -
Bva04g00205 1644 ProSiteProfiles Biotin carboxylation domain profile. 1184 1629 IPR011764 -
Bva04g00205 1644 MobiDBLite consensus disorder prediction 562 583 - -
Bva04g00205 1644 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g00205 1644 PANTHER AUXIN RESPONSE FACTOR 1 1095 - -
Bva04g00205 1644 TIGRFAM accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1185 1630 IPR004549 GO:0016874
Bva04g00205 1644 Gene3D - 983 1077 - -
Bva04g00205 1644 Pfam Biotin carboxylase C-terminal domain 1519 1624 IPR005482 -
Bva04g00205 1644 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 1298 1506 IPR005479 GO:0005524
Bva04g00205 1644 Gene3D - 130 233 IPR015300 -
Bva04g00205 1644 SMART B3_2 132 234 IPR003340 GO:0003677
Bva04g00205 1644 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
Bva04g00205 1644 CDD B3_DNA 131 223 IPR003340 GO:0003677
Bva04g00205 1644 SMART Biotin_carb_C_2 1519 1625 IPR005482 -
Bva04g00205 1644 SUPERFAMILY PreATP-grasp domain 1169 1296 IPR016185 -
Bva04g00205 1644 Gene3D - 1174 1633 - -
Bva04g00205 1644 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1266 1532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00205 Bva-Chr4 1237817 1254886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00205 1118 1632 Acyl Lipid Metabolism Gene Families AT5G35360 84.483 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva04g00205 CPSase_L_D2 1.5e-82 CL0179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00205 - - ccaj:109803454 1682.54