Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00197 ATGGCGGGTGCGATGAAGAAAGTCGACAAGATTCGTCAAATTGTGCGTCTGAAGCAAATGATGATGCGATGGAAGCAGTTGACTTTACGACGCCGTTCTGTTCTCTCTGATTCCAACAACTGCGCCGAATCGGAGTCCAAATCGAAAACCAATCGCCGCACGCCTCCGGGCTTTTTGGCAGTCTATGTTGGCATGGAGCGACAACGTTTTGTCATTCCTGCTCGTTTTCTCAACCTTCGCATTTTCAAGGGTCTGCTAAAGAAAGCAGAAGAGGAGTTTGGTTTCCAATGCAATGGAGGTTTGGTTCTGCCATGCGAGGTTGGTTTTTTCAAAGTACTTTTGAAACATCTCAATAAAGATGAGGGTAgatttggaaaattttctttggaagAGTTCGTTAAGATTGTCTCCGATGTGGGTTCCGATTCCGGCAATTGCAAAGAAACCGTCATTGCTTTTACTCCTCTGTTGCAGAAAGCGAGAGTCTG 488 0.4406 MAGAMKKVDKIRQIVRLKQMMMRWKQLTLRRRSVLSDSNNCAESESKSKTNRRTPPGFLAVYVGMERQRFVIPARFLNLRIFKGLLKKAEEEFGFQCNGGLVLPCEVGFFKVLLKHLNKDEGRFGKFSLEEFVKIVSDVGSDSGNCKETVIAFTPLLQKARV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00197 162 PANTHER - 1 159 - -
Bva04g00197 162 Pfam Auxin responsive protein 16 116 IPR003676 GO:0009733
Bva04g00197 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 159 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00197 Bva-Chr4 1186627 1187440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00197 7 115 Calmodulin-binding Proteins AT3G43120 39.850 6.65e-27 97.4