Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00195 ATGAAGAGCACCGTTGCTTGCTTCCAAAACCTTTGTATCTCTTCATGTACAAAAGTTGCTTGTTTTACCAACTCGTGTTTCTTGTTTATGTCTTGTTTTTATCGCTTCCTCCTCCTCAGATCAAACCCATTATGGGTTCAAATTGGCTATTTCGCCTCTCTTTGCATTTTTGGTTTCTGGGTTCTCAAAGTTCTTAAGCCTAGAACTGATTCATTTACCCCTAGGGACTTGGATTTGTTCTTCACCTCGGTCTCAGCCACCACTGTTTCAAGCATGTCCCCGGTTGAAATGGAGGTTTTTTCTAACCCCCAACTAACTGTTATGACCATCTTAATGTTTATAGGTGGTGAAGTCTTCACCTCCATGTTGGGACTCTTTTTCATTAGGTTAAAGCACAAAGCACACCAAGATAGGATTGCTTCTGTTAATAGCAGTCCTCATGCTCCAAAAACCACTGATCGTATTGAACAAATTGAGTTGGGTGATGTGGGACGTGTATTACCTGTAGTCAAAATCCCTGCAGTTGCTACTTCATATGAGTCATTAGATGGATTGTATTCAAAGCTAACATGGAACCATGTCAGTGATTGTAGGGAATCTGGATCCGAATATTTGTGGTATTCATCGGTCAGATACTTGGGTTTTGTTGTCCTAGGTTACCTTTTAGCTGTCCATCTTATAGGAGCTGCAATGGTGTCACTTTACCTTGCTGTGATCTCAAGTGCAGCTGAGGTTCTGAAAAACAAAAGCCTAAAACAGTTCACATTCTCTGTTTTCACAGTAGTTTCAACTTTTGCAAGCTGTGGTTTCATTCCAACAAATGAAAACATGGTTGTTTTCAGCAGAAACTCAGGTCTccttctcattctcattccTCTAATGCTCCTTGGGAACACACTGTTCCCTCCTTGCTTGAGATTCTTGATATGGGCATTGAGGAAACTCTTCAAGAAACAAGAATCAGAGTTTCTTCTGAAGAGAACTGAGGAGGTTGGGTACAAACACTTGCTTCCAGGGTTGTATTCAAACTTTCTGGTGGCTACAGTTTTTGGGTTCGTGATGGTTCAATCCATATTGTTGTGGGCAATGGATTGGGATTCAGAAGATCTTGAGGGACTGAATTCTTACCAGAAAACAGTTGGTGTTATCTTCCAAACTGTAAATTCTAGACATACAGGAGAGACTATTATGGATTTGTCCACCATATCAGCTGCAAGCTTGGTATTATTTGTGGTCATGATGTACCTTCCTCCTTACACGTCTTTCCTTCCAATTCCATTTGAAGATgacatgaagaagaagaacccaGAAAGTtgtaaaaggagaagaaaaagaaaagctacgGAGAATTTCATATTCTCTCAACTCTCCTATCTCACCatctttatcattctcacaTGCATAACTGAAAGAGATGCGTACGGGAATGTAGGATTTTCGATGGGATACAGTTGCAAACGACAGTTACATGGAGATGGGAATTACCAAGACAAGTGGTTTGGATTTGCTGGGCGATGGAGTGATGAAGGCAAGATCATTCTCATATTGGTTATGTTGTTTGGGAGGCTTAAGAAATTCAACATGGATGGTAGCAAGGCTTGGAACCTTCTTTA 1613 0.3869 MKSTVACFQNLCISSCTKVACFTNSCFLFMSCFYRFLLLRSNPLWVQIGYFASLCIFGFWVLKVLKPRTDSFTPRDLDLFFTSVSATTVSSMSPVEMEVFSNPQLTVMTILMFIGGEVFTSMLGLFFIRLKHKAHQDRIASVNSSPHAPKTTDRIEQIELGDVGRVLPVVKIPAVATSYESLDGLYSKLTWNHVSDCRESGSEYLWYSSVRYLGFVVLGYLLAVHLIGAAMVSLYLAVISSAAEVLKNKSLKQFTFSVFTVVSTFASCGFIPTNENMVVFSRNSGLLLILIPLMLLGNTLFPPCLRFLIWALRKLFKKQESEFLLKRTEEVGYKHLLPGLYSNFLVATVFGFVMVQSILLWAMDWDSEDLEGLNSYQKTVGVIFQTVNSRHTGETIMDLSTISAASLVLFVVMMYLPPYTSFLPIPFEDDMKKKNPESCKRRRKRKATENFIFSQLSYLTIFIILTCITERDAYGNVGFSMGYSCKRQLHGDGNYQDKWFGFAGRWSDEGKIILILVMLFGRLKKFNMDGSKAWNLL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00195 537 Pfam Cation transport protein 207 416 IPR003445 GO:0006812|GO:0008324|GO:0055085
Bva04g00195 537 PANTHER SODIUM TRANSPORTER HKT1 33 536 - -
Bva04g00195 537 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 33 536 - -
Bva04g00195 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00195 Bva-Chr4 1172166 1174719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00195 63 536 Inorganic Solute Cotransporters AT4G10310 44.578 2.40e-131 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00195 K24976 - egr:104437321 558.91