Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00194 atgaagaactTGGACTTTTTCAGTAGAAAATTAGAGCACCTTTATACCATTACACACAGCAATATGCTCCCAGCCATTCGAGATGTTAGCATGTCATTATATCAAGTTATTGCCTTCAGTGTTAACCCTTTCTATATCcaacttttttattgtatCTTCATGTCTCTTTTGGGTTACTTGCTTTTGAAGGTTTCAATGCCAAGAACCCAAGTTAGACCTAAAGACCTTGATCTGTTCTTCACATCTGTTTCTGCATCCACTGTTTCCAGCATGACTGTAATAGAAAAGGAAGTCTTCTCCAATTCCCAGCTGATACTCATAAGCTTCCTCATGTTAGCAGGTGGGGAGGTTTTCATTTCCCTACTTGGacttgaattttcaaaattcaaccTCACCCAAGAACACTGTGCCAAAAACAAAGCAAGTACTCTGCAGATTCCAGACCAGGCACTTCCAAATGCCAATGAATCAATTGAATTAGCCATAGTTTCTCTTCCTCACCCACTGCACCAGAAACAGAGTGATAGTGATTTTGGTTCAGATGGAATAACAGTGTCCTCTGATGATAAACTAAAGTATAACTCTACTAAGTTTCTGGGTTATACAGTTTTGGGTTATCTAATGGTTGTTCATCTTTTTGGCTCTAGTTTGGTTTCCTTGTACATCAGCTTGATACCGAGTGCGAGAGAAGTACTCAGAAGCAAAGGCCTCAACTTGctgacattttctttctttactgTGATTTCTAGTTTTTCCAACTGTGGTTTTCTCCCCACTAATGAGAACATGATAGTTTTCAAGAAGAATTCAGGTCTGCTCTTGCTTATAATCCCACTGATTTATCTTGGAAACACCCTTTACCCACCATGCTTGAGGGTTCTGATATGGTTTCTGAAGAAAATAACCAGAAGAGAAGAGCTCTCTTACATTCTGAGGAATTATAGAGAGATGGGTTTTGATCATTTGCTCTCTGATCTTCATTGTTGGCTCTTGGTTGGTACTGTTGTTGGGTTTACTTTGACACAATTTGCAATGTTCTGCTTCATGGAATGGAACTCAGAAAATATGGACGGTCTAGATTTCTATCAGAAACTGGTTTGCTCTTTGTTTCAAGTTGTAAATGCCAGGCACGCAGGTGAATCTGTTTTCCATCTAAACTCCATCTCTGCAGCCATATTGGTGCTCTTCATGGTCATGATGTACCTCCCACCATACACTAAATTTTTGCCCGCAAGGGACCAAGAAAATGATACCAACAAGGGCAAAAGAAGCCTAGTGGAGTGTCTTTTATTCTCTCAACTCTCTTACTTGGTCATCTTCATCATAGTGATTTGCATCACTGAGAGTAAAAGCTTAAGAGAAGACCCTCTCAACTTTAATGTCTTCAACATTACCCTAGAAGTTATCAGGCACGTCTCTCTATCTTTATCTCACCAAACAgattataaattacatttcatcaaaactaagaaagattTGATGAATTTACTCAATGAGCATTCATA 1505 0.3701 MKNLDFFSRKLEHLYTITHSNMLPAIRDVSMSLYQVIAFSVNPFYIQLFYCIFMSLLGYLLLKVSMPRTQVRPKDLDLFFTSVSASTVSSMTVIEKEVFSNSQLILISFLMLAGGEVFISLLGLEFSKFNLTQEHCAKNKASTLQIPDQALPNANESIELAIVSLPHPLHQKQSDSDFGSDGITVSSDDKLKYNSTKFLGYTVLGYLMVVHLFGSSLVSLYISLIPSAREVLRSKGLNLLTFSFFTVISSFSNCGFLPTNENMIVFKKNSGLLLLIIPLIYLGNTLYPPCLRVLIWFLKKITRREELSYILRNYREMGFDHLLSDLHCWLLVGTVVGFTLTQFAMFCFMEWNSENMDGLDFYQKLVCSLFQVVNARHAGESVFHLNSISAAILVLFMVMMYLPPYTKFLPARDQENDTNKGKRSLVECLLFSQLSYLVIFIIVICITESKSLREDPLNFNVFNITLEVIRHVSLSLSHQTDYKLHFIKTKKDLMNLLNEHS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00194 501 Pfam Cation transport protein 188 402 IPR003445 GO:0006812|GO:0008324|GO:0055085
Bva04g00194 501 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 33 470 - -
Bva04g00194 501 PANTHER SODIUM TRANSPORTER HKT1 33 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00194 Bva-Chr4 1169583 1171443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00194 63 469 Inorganic Solute Cotransporters AT4G10310 47.711 1.35e-118 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00194 K24976 - gmx:100797835 505.753