Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00183 ATGGCGTGGAGACATGTTTACAAGGACGTGATTCCATTTGCTGCAATGGTTACAGTTGAGTGCATCAACGTTGGAGTAGCCATTCTATTCAAGGAAGCCACTGAGAAAGGGCTAAGTTATCTTGTCTTCATAGTCTATTCATTCGCTGTCTCCACTGTTGTTCTTCTTCTGCCTTTGCCCTTCATCTTCTGCAGcTCAACTGGGTTTCCTCCGATCAAGTTTTCTGTGCTCTGCAGAATTTTCTTACTTGGAGTGATTGGTTTTGGTGCTGTGCTTACTGGATTGAAAGGGCTTGAGTACAGTTCTCCCACTCTTGCTTCTGCCCTCGGCAACCTCATCCCAGCCTTTACCTTCATACTCGCTGTAATTTTCAGGATGGAAAAGGCAGATTTAAGATATTCAAGCACTAAGGCCAAAATCATGGGTTCAGTAGTATCAATATCAGGTGCAGTCATAGTTGTTCTCTACAAGGGCCCTACACTCTTCTCGGCTTCATCTCCATCACAACCTCCTTCAATTAATTCCCGACTTAGCTCATCATTACAGACGAATTGGATTCTAGGAGGCTTCCTACTTGCTCTTGAGTGTCTTCTGTCTTCAATATGGTACATTCTGCAGACCCATATCATGAAACTCTATCCAGCAGAGCTCATTGTGGTGTTCTTGTACAACTTGAGTGGGACTCTCATATCAGCACCAATTTGTTTTCTAGCAGAACCAAAGTTGAGTGCTTGGAGGCTAAAGCCTGATGTAACAATGGTCTCCATTATATACTCCGGAGTTATGTGCACAGCCTTCAGTTCTCTTGTTCATACTTGGGGCGTCCGTGTAAAGGGCCCTCTATATGTATCAATTTTCAAGCCTTTTTCCATTGCCATTGCTGCTGCTATGAGTGCCATATTCCTTGGTGATGCTCTCCATCTGGGCAGTGTTGTTGGATCTGTGATACTTTCAATTGGGTTTTATGCTGTGATATGGGGGAaggcaaaagaagaagaagaattaaATACTGCCAAGTTATACAAAGCTGCACTTGGAAATTGCTTTGAAGCGGAAGAATGGGGACCAGTTGAGTTCTTCATCATGGCAAAGCATTTTGAGCTTCAACGGAAGGCGCCAGATGAATACAATTTAAAAATTGTAGTACTTCAGCATGAGACATGGAAAGCCTATTG 1175 0.4264 MAWRHVYKDVIPFAAMVTVECINVGVAILFKEATEKGLSYLVFIVYSFAVSTVVLLLPLPFIFCSSTGFPPIKFSVLCRIFLLGVIGFGAVLTGLKGLEYSSPTLASALGNLIPAFTFILAVIFRMEKADLRYSSTKAKIMGSVVSISGAVIVVLYKGPTLFSASSPSQPPSINSRLSSSLQTNWILGGFLLALECLLSSIWYILQTHIMKLYPAELIVVFLYNLSGTLISAPICFLAEPKLSAWRLKPDVTMVSIIYSGVMCTAFSSLVHTWGVRVKGPLYVSIFKPFSIAIAAAMSAIFLGDALHLGSVVGSVILSIGFYAVIWGKAKEEEELNTAKLYKAALGNCFEAEEWGPVEFFIMAKHFELQRKAPDEYNLKIVVLQHETWKAY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00183 391 PANTHER WAT1-RELATED PROTEIN 10 333 - -
Bva04g00183 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Bva04g00183 391 PANTHER WAT1-RELATED PROTEIN 10 333 IPR030184 GO:0016021|GO:0022857
Bva04g00183 391 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020|GO:0016021
Bva04g00183 391 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020|GO:0016021
Bva04g00183 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00183 Bva-Chr4 1118297 1122694 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00183 1 332 Nodulin-like Gene Family AT5G40240 57.784 1.60e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00183 - - gmx:100805667 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00183 04 1118297 1122694 Bva04g00183 04 1118297 1122694 ECH
Bva03g02260 03 19666519 19669426 Bva04g00183 04 1118297 1122694 ECH