Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00182 ATGGCGTGGAGACATGTTTACAAGGACGTGATTCCTTTTGCTGCACTTATTACAGTTGAGTGCACCAACGTTGGAGTGACCATTCTATTCAAGGAAGCCACTGAGAAAGGGCTCAGTTACTTTGTCTTCATATTCTATGCCTACGTTCTCTCCACTCTTGTGCTTCTTCTGCCTTTgcccttcatcttcttcagCTCAACTGGGTTCCCTCCAATCAAGTTTTCTGTACTCTGCAGAATTTTCCTCCTTGGAGGGATTGGTTTTGGTTGTGTTCTTTCTGGATATAAAGGGATTCAGTACAGTTCACCCACTCTTGCTTCTGCCCTCAGCAACCTCGTGCCAGCCTTTACCTTCATACTTGCTGTAATTTTCAGGATGGAAAAGGCAGATTTAAGATATTCAAGCACTAAGGCCAAAATCCTGGGCTCAATAGTATCAATCTCAGGTGCAGTTATAATAGTTCTCTACAAGGGCCCTGCACTCTTCTCTGCTTCATCTCCATCACAACCTCCGTCAATCAATTCCCTACTTAGCTCATCATCACAGACGAATTGGATTCTAGGAGGCTTTCTACTTACCCTCGAGTTTCTTCTGACTTCAATATGGTACATAGTGCAGACCCATATCTTGAAACTATATCCAGCAGAGCTCATTGTGGTGTCCTTGTACAACGTGTGTGGGACTCTCATATCAGCACCACTTTGTTTTCTAGCTGAACCACAGTCGAGTGCTTGGAGGCTAAAGCCTGATATAACAATGGTCTCCGTTATCTACTCGGGAGTGTTTACAGGCTTCGCTGCTCTTGTTCACACTTGGGGCCTCCGTGTAAAAGGCCCCCTTTATGTATCAATCTTTAAGCCTTCTTCCATTGCCATTGCCGTTGCTATGAGTGCCATATTCCTTGGTGAGCCGCTCCATCTGGGCAGTGTTGTTGGATCTCTGATACTTTCAATTGGGTTTTACGCTGTCATATGGGGGAaggcaaaagaagaagaagaattaagTGAGGATAATGGGTTAATTTGCAGCAGAACCCAGCCATGGTCGGATAGCAAGACACCTCTGTTGCAGGGcta 1076 0.4349 MAWRHVYKDVIPFAALITVECTNVGVTILFKEATEKGLSYFVFIFYAYVLSTLVLLLPLPFIFFSSTGFPPIKFSVLCRIFLLGGIGFGCVLSGYKGIQYSSPTLASALSNLVPAFTFILAVIFRMEKADLRYSSTKAKILGSIVSISGAVIIVLYKGPALFSASSPSQPPSINSLLSSSSQTNWILGGFLLTLEFLLTSIWYIVQTHILKLYPAELIVVSLYNVCGTLISAPLCFLAEPQSSAWRLKPDITMVSVIYSGVFTGFAALVHTWGLRVKGPLYVSIFKPSSIAIAVAMSAIFLGEPLHLGSVVGSLILSIGFYAVIWGKAKEEEELSEDNGLICSRTQPWSDSKTPLLQG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00182 358 PANTHER WAT1-RELATED PROTEIN 10 332 IPR030184 GO:0016021|GO:0022857
Bva04g00182 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 329 - -
Bva04g00182 358 PANTHER WAT1-RELATED PROTEIN 10 332 - -
Bva04g00182 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Bva04g00182 358 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020|GO:0016021
Bva04g00182 358 Pfam EamA-like transporter family 190 324 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00182 Bva-Chr4 1115020 1118032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00182 1 331 Nodulin-like Gene Family AT5G40240 56.886 6.86e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00182 - - mtr:MTR_1g014510 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00182 04 1115020 1118032 Bva04g00182 04 1115020 1118032 ECH
Bva08g01291 08 6732649 6735487 Bva04g00182 04 1115020 1118032 ECH