Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00177 ATGTCACAAGGCTATGCTATTGAGCTTTACTTGGATCCTGCCCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGTACCCAACTCATCGAAATTGAGTCACGGCCTCAcatctctctcttctccaGCCCATTCATTGATCCCGCTAAGCTTGAATCCATTGTCAAGAATTTTGCTGCCAAGCAGGAACCTTTgcctatttctttctcttcaattgGGAGTCTTCCAAATGACAACAATGTGCTCTTTCTTGCACCGACGCCCTCAATTTCTCTACTTCAGTTCCAATCCCAATTGTGTGATGCACTGAAGAAAGAAGGCATCGAGATAGGAGAGGAGTATCGTCCAGATTCTTGGATTCCTTATTGCTCGGTTGCTCAGGAAGTTCCAAAAGCTAGGATGGCTGAGGCGTTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTACTGGGTATGCTATGGATATTGGGCTGGTGGAATTCTCACCCGTTCGTGAGCTCTTTTCCTTTGGGCTTGGCAATACAGTAGAATG 548 0.4361 MSQGYAIELYLDPALENQVLKAWNVLARRQISTQLIEIESRPHISLFSSPFIDPAKLESIVKNFAAKQEPLPISFSSIGSLPNDNNVLFLAPTPSISLLQFQSQLCDALKKEGIEIGEEYRPDSWIPYCSVAQEVPKARMAEAFCVLRDLKLPVTGYAMDIGLVEFSPVRELFSFGLGNTVE 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00177 182 Gene3D Cyclic phosphodiesterase 4 178 - -
Bva04g00177 182 Pfam 2'-5' RNA ligase superfamily 41 157 - -
Bva04g00177 182 PANTHER - 1 181 - -
Bva04g00177 182 SUPERFAMILY LigT-like 4 155 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00177 Bva-Chr4 1094922 1096304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00177 1 182 Calmodulin-binding Proteins AT5G40190 75.275 4.22e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00177 - - zju:107415389 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00177 04 1094922 1096304 Bva04g00177 04 1094922 1096304 ECH