Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00170 ATGGCGTTGAGCTCAGCTTGGACAGCAAAGCAGAACAAAATGTTTGAGAATGCTTTGGCCATGTATGAGAAGGACAGCCCAGATTGGTGGCAAAAGCTGGCGGGGGCAGTGGGAGGGAAGACGGTGGAGGAAGTCAAAATACATTATCAGAAGCTTGTGGAAGATGTGAAGCTTATTGAGAATGGCCAAGTACCTCTCCCCAGTTACAGAAACATTGCTTCAGGGACCAACAAACCTTACAATTTCATGGGTGAACAACAAAGGATGAAGAATCTAAGCCTACATTG 287 0.4599 MALSSAWTAKQNKMFENALAMYEKDSPDWWQKLAGAVGGKTVEEVKIHYQKLVEDVKLIENGQVPLPSYRNIASGTNKPYNFMGEQQRMKNLSLH 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00170 95 Gene3D - 2 66 - -
Bva04g00170 95 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Bva04g00170 95 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Bva04g00170 95 SMART sant 3 55 IPR001005 -
Bva04g00170 95 CDD SANT 6 53 IPR001005 -
Bva04g00170 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 95 - -
Bva04g00170 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 95 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00170 Bva-Chr4 1055681 1056441 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva04g00170 Myb_DNA-binding 1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00170 - - pvy:116119438 134.42