Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00168 ATGATGAACTTTTCTATATATGGTCAGTGTCGGGTGCCTCCAGGGTTCCGATTCCATCCCACAGAAGAAGAGCTTCTGCAATATTACCTGAGGAAGAAAGTGGCTTATGAAAAGATTGACCTAGATGTGATTCCCGTAGTTGATCTCAATAAACTTGAGCCCTGGGACATTCAAGAGAAGTGCAAAATAAGGTCGACTGATCCTCAGAACGAGTGGTATTTCTTCAGTCGCAAGGACAAGAAGTATCCAACTGGAATTAGAACGAATAGAGCAACGGCAGCAGGATTCTGGAAGGCCACGGGTAGGGACAAGATCATCTACAGTAGTGGGTTTAGAAGAATTGGGTTGAGGAAGACACTGGTTTTTTACAAGGGACGGGCTCCCTATGGACAAAAATCTGATTGGATTATGCATGAGTATCGACTAGAAGACAACATCCATGACCAAACTGCAAGCAAAGTAACCACTAAAACTTCGGTTTGGGATCCCGTAGGAGAGTCTTTGCACGAAGAAGGATGGGTGATCTGTCGTgtattcaagaaaaagaaccaCCAGAAAAGCGTAGACAGTCCTAAGACCTCGTCCACCTCCATCTCCACGAATTCAAACACCGAAACACTAGGTTCAGCAGCTGATCATaggattctggaccaaattcTCTCCTACATGGGAAGCACAAGTTACAAGATGGAAAACGATTTGTTTAGCAGATTCAATTCTATTATCTCTGACGACAACGATACATGCAgcaatgatatatttatcCATCTTCCCACGTTGGAAAACCCCAGCATGAATCATAATTCATCAGATCAATCAGTTGTTGATATTTTTGCAGAAACTGAAGATCATGAGGGCTCTAAGACAAAGATGAATAACTGGGTTGAACTTGAAAGGCTAGTAGCTTCTCAATTGAATGGCCAATTGCAACAAGAGACCTACTCAAAGCAGAATCTATCGTGTTTCAGTTTCGGTCATGTTCCTAATGATGATGTTCAGACACCAGCAACCCATTACTCTCATCCAGGCAGATCAATAATGGATCAAATCCTAGAAATCTACAGTGgcaacaacagcagcagcagaaaTAACGAGAATGATCCATGGAGCATCacaaatta 1121 0.397 MMNFSIYGQCRVPPGFRFHPTEEELLQYYLRKKVAYEKIDLDVIPVVDLNKLEPWDIQEKCKIRSTDPQNEWYFFSRKDKKYPTGIRTNRATAAGFWKATGRDKIIYSSGFRRIGLRKTLVFYKGRAPYGQKSDWIMHEYRLEDNIHDQTASKVTTKTSVWDPVGESLHEEGWVICRVFKKKNHQKSVDSPKTSSTSISTNSNTETLGSAADHRILDQILSYMGSTSYKMENDLFSRFNSIISDDNDTCSNDIFIHLPTLENPSMNHNSSDQSVVDIFAETEDHEGSKTKMNNWVELERLVASQLNGQLQQETYSKQNLSCFSFGHVPNDDVQTPATHYSHPGRSIMDQILEIYSGNNSSSRNNENDPWSITN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00168 373 ProSiteProfiles NAC domain profile. 12 181 IPR003441 GO:0003677|GO:0006355
Bva04g00168 373 Pfam No apical meristem (NAM) protein 13 142 IPR003441 GO:0003677|GO:0006355
Bva04g00168 373 MobiDBLite consensus disorder prediction 189 205 - -
Bva04g00168 373 MobiDBLite consensus disorder prediction 186 205 - -
Bva04g00168 373 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 334 - -
Bva04g00168 373 Gene3D NAC domain 21 186 IPR036093 GO:0003677|GO:0006355
Bva04g00168 373 SUPERFAMILY NAC domain 6 181 IPR036093 GO:0003677|GO:0006355
Bva04g00168 373 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 7 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00168 Bva-Chr4 1043470 1045334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00168 2 342 NAC Transcription Factor Family AT2G46770 52.326 2.21e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00168 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00168 - - palz:118040839 380.563