Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00161 ATGCTGGGTGCTTCAAACCATAGTCATTTGGGAGACCCATGTCTTGTATTGACTGCTGATCCGAAGCCTCGTCTCCGTTGGACTGCTGACCTTCATGAACGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCAGTAAAGCAACACCAAAAGCCATCATGCGAACCATGAATGTGAAGGGTTTGACTCTTTATCATTTGAAGAGCCATCTTCAgAAATACAGACTTGGTAAGCAATCTGGGAAAGAATTCGGCGAGGGATTCAAAGATGGAATCGCAGCTTCATATCATGTAGACAGCCCTGGTACTGATAACTCTTCTCAAAAGTTGCCAACTTCTGATGCAAACGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTACATTTGCTAGTGGAgGCTGAGAAGCACTTGCAGATTCGCCAGGAGGCAGAGCGGAGGTATATGGCCATTCTTGAGAGAGCTTGTAAAATGTTGGCTGATCAGTTTATTAGCGGAAGTGGAACAGTCACAGACACAGACAGCCAAAAATTTCAAGGACTGGGAAATAAAGCATCAAGAAGTCCTGTGCTTGACCCCCTTGGCTTTTACACTTTACCATCTGCTGAGGTTGCTACAATGCATGTCCCAGAAGTAGCAGCTGCTAGTATCCAGCCACAAAGGGCCGACTGTTCCACCGAAAGTTGCCTAACATCACATGAGAGTCCTGGGGTAACAAAGAGGATCCTGGGCTTGGATTCAGCAGTAGCACCTTTGATAGGGAGTGAAGCCAACATGAGAACTCAAGGCATCCCCCAAGTTAATCCTCATGGGTTAACTAGGTATGGCATTTA 854 0.4614 MLGASNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKEFGEGFKDGIAASYHVDSPGTDNSSQKLPTSDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQEAERRYMAILERACKMLADQFISGSGTVTDTDSQKFQGLGNKASRSPVLDPLGFYTLPSAEVATMHVPEVAAASIQPQRADCSTESCLTSHESPGVTKRILGLDSAVAPLIGSEANMRTQGIPQVNPHGLTRYGI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00161 284 Gene3D - 21 79 - -
Bva04g00161 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Bva04g00161 284 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
Bva04g00161 284 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Bva04g00161 284 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 283 IPR044848 GO:0003700
Bva04g00161 284 MobiDBLite consensus disorder prediction 95 117 - -
Bva04g00161 284 Pfam MYB-CC type transfactor, LHEQLE motif 120 165 IPR025756 -
Bva04g00161 284 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 283 - -
Bva04g00161 284 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Bva04g00161 284 MobiDBLite consensus disorder prediction 99 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00161 Bva-Chr4 1011016 1014761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00161 11 239 G2-like Transcription Factor Family AT3G24120 49.167 8.82e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g00161 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00161 - - gmx:100779871 414.075