Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00155 ATGGGTCGCGAAACGATGCTACTTCCGCCGCCACCAAGCGCTGCAGGAACAGTGAACTCAGCACTAGTAGCGGCACCAGCACAGATAGCGGCCCCAGGAGCATCACCTACATCACTCGCTCCTGGGTTTCGCTTTCACCCAACTGATGAGGAGTTGGTTATTTACTACCTCAAGCGCAAGGTCTGTGGGAAGAGCTTCCGATTTGATGCTATTTCCGAGGTGGATATCTACAAAAGCGAGCCTTGGGACCTAGCAGATAAGTCGAGGTTGAAGACCAGGGACCAGGAATGGTACTTTTTTAGTGCATTGGACAAGAAATACGGAAATGGAGGAAGGATGAACAGGGCTACCGGCAAAGGGTACTGGAAAGCAACAGGAAATGACCGCCCTGTTAAGCATGAACAACGGACTGTAGGTTTGAAGAAAACTTTAGTATTTCATAGTGGTCGAGCTCCAGATGGTAAGCGGACCAATTGGGTCATGCATGAGTACAGGCTTGTTGATGAAGAACTGGAGAGAGCTAGGGTTGGATCCACCCAGGATGCATATGTTTTGTGTAGAGTGtttcacaaaaataacattGGACCTCCAAATGGACAACGTTATGCGCCTTTCATTGAAGAGGAATGGGATGATGCTCCAGGCCTGATTCCAGGGGCAGAGGCTGGGGACGAAGTTCCCCTTGCTGTCCAGTATCCATGCACTGAAGGCAGTGACCGTGGTGCACGTGTTGAAGGCAATGGTAGTGTTGCGTATGTTGAAGGGAATAATGTTGTACAGGATACTCAGTCCATCACAAAAACTCCGTTTGATGTTAATAAGCTTCCGATAGAAACGCAGAATCTCCTTGCCGTCTGCAAGAGGGAGAGTATGGACGAGTACCCTTCGCCGGAAAAGGATAATTCAAAGCAGCATGTGGATGAATACCCTTCACCACACACAGACAACCCAAAGCCTTTCTCAATTTACAAGAGAAGGCGGTACAATAGTTTGAATGCTAGTCATACAAATGTTTCCGAGGATTCGACTCGAACAAGCTTGGATCCTTGCTCATCTACAACAACCACTGCTGCTACATTGCCTGCTCCAACATCAACCAGCACTGCAACAAGAAAACACTTTCTGTCTGCATTAGTCGAATTTTCTCTACTGGAATCACTTGAACCGAAGGAAAATCCTTCTGTTAACCCACCGGAATTTGATGTCTCTAATCTTGATTCTTCTGTGCCTCCTCACTGCATAAAATTCATAGAGCACTTGCAGAGCGAGATTCAGAAACTGTCTGTTGAAAGGGAGACGCTCAAGTTTGAGATGATGAGTGCCCAAGCCATGATTAACATTCTTCAATCCCGCGTTGACATTCTGAACAAAGAAAGCGAAGAATTGAAGAGGAAGACCACCTA 1403 0.4661 MGRETMLLPPPPSAAGTVNSALVAAPAQIAAPGASPTSLAPGFRFHPTDEELVIYYLKRKVCGKSFRFDAISEVDIYKSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATGKGYWKATGNDRPVKHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERARVGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDAPGLIPGAEAGDEVPLAVQYPCTEGSDRGARVEGNGSVAYVEGNNVVQDTQSITKTPFDVNKLPIETQNLLAVCKRESMDEYPSPEKDNSKQHVDEYPSPHTDNPKPFSIYKRRRYNSLNASHTNVSEDSTRTSLDPCSSTTTTAATLPAPTSTSTATRKHFLSALVEFSLLESLEPKENPSVNPPEFDVSNLDSSVPPHCIKFIEHLQSEIQKLSVERETLKFEMMSAQAMINILQSRVDILNKESEELKRKTT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00155 467 ProSiteProfiles NAC domain profile. 39 191 IPR003441 GO:0003677|GO:0006355
Bva04g00155 467 SUPERFAMILY NAC domain 35 192 IPR036093 GO:0003677|GO:0006355
Bva04g00155 467 Coils Coil 417 467 - -
Bva04g00155 467 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 31 465 - -
Bva04g00155 467 MobiDBLite consensus disorder prediction 291 312 - -
Bva04g00155 467 Pfam No apical meristem (NAM) protein 41 166 IPR003441 GO:0003677|GO:0006355
Bva04g00155 467 MobiDBLite consensus disorder prediction 334 367 - -
Bva04g00155 467 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78-LIKE 31 465 - -
Bva04g00155 467 Gene3D NAC domain 48 194 IPR036093 GO:0003677|GO:0006355
Bva04g00155 467 MobiDBLite consensus disorder prediction 290 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00155 Bva-Chr4 961856 966412 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00155 1 465 NAC Transcription Factor Family AT3G10480 42.754 6.03e-117 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00155 NAM 2.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00155 - - gmx:100808783 671.389