Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00153 ATGGCTGTTTTCATAGGTCCTGATTCTAGTACACTTCTTCCGGGGTTCCGATTCAACCCTACAGACCATGAACTCGTTCGTTTTTACCTCAAGCTCAAAGTCTGCCGTAAATTCCTCCGCTTGGATCCAATCGGAGAGATTGACATATACAAATTCGTACCTTTGGACCTCCGCGGAGTGTGGAAGTTGAAGAGCAAGGACTTGAAGTGGTACTTCTACGCTACGTTGGACAGAAAGTATGCAAATTCGTCTAGGACGAATCGGGCCACTGACAGAGGGTACTGGAAGACAACAGGGAAAGACCGGCCAGTGTTCGAGGGTTCCCGAAACTTTGGGATGAAGAACACCTTGGTTTATCATTATGGGCGGGCACCAAATGGATGCTTTTTGCTCTATAGGCTTTTCCAGAAGAGTGGTGCTGGGCCGAGGAATGGAGAGCAATATTGTGCCCCGTTTCGAGAGGAGGAATGGAAAGATTTGGAGGCTGTGGCGGCTCCACCTGCTAATGACGCCGGCGAAGAGGCTGTGATTATTGGGGACAGTGTTAGTGTTAGTGTTGAAGTAAATAACCTAAGAATCATGAAATG 587 0.4804 MAVFIGPDSSTLLPGFRFNPTDHELVRFYLKLKVCRKFLRLDPIGEIDIYKFVPLDLRGVWKLKSKDLKWYFYATLDRKYANSSRTNRATDRGYWKTTGKDRPVFEGSRNFGMKNTLVYHYGRAPNGCFLLYRLFQKSGAGPRNGEQYCAPFREEEWKDLEAVAAPPANDAGEEAVIIGDSVSVSVEVNNLRIMK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00153 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78 128 186 - -
Bva04g00153 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78 10 127 - -
Bva04g00153 195 Gene3D NAC domain 21 138 IPR036093 GO:0003677|GO:0006355
Bva04g00153 195 ProSiteProfiles NAC domain profile. 12 154 IPR003441 GO:0003677|GO:0006355
Bva04g00153 195 SUPERFAMILY NAC domain 8 128 IPR036093 GO:0003677|GO:0006355
Bva04g00153 195 Pfam No apical meristem (NAM) protein 14 124 IPR003441 GO:0003677|GO:0006355
Bva04g00153 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 127 - -
Bva04g00153 195 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 128 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00153 Bva-Chr4 959262 961502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00153 10 178 NAC Transcription Factor Family AT5G04410 51.546 4.77e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00153 NAM 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00153 - - csin:114321209 221.09