Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00151 ATGTCAAGTGAGGAAGCATGGCCTGCAAATGTTAAAGAATCTCAAAAATCTGTACCATCATCTGATAAGAGAAGTGGGTATGATCCAAAAACAGGCATCTATCACTGTATTGTTAGTCTTGGTCCCCAGCAAGAAATCCCAATAAGGCCTCACCTAGACACTGCAAGTCTTGTGCTATCACAGTTCCCTCAGCCACACCTTGCAGAGACAAGAATTGCCTTCATTGATTCAACTACTAATCGTCATCTAAGTTATGGCGAGCTTCGCCGCTCTATTTTCTCCCTTGCCTCTAGTTTGTATCATGGACTTGGGATCAAGAAAGGAGATGTGGTGTTTGTGCTGTCACCAAACTCACTCTTGTACCCAACAATCTGCCTAGCTGTGTTATCAATTGGAGCAATTTTCACTACTGCCAATCCCCTTAATAATCCCTCTGAAATTGCTAAGCAAGTAAGAGATTCAGGTGCTAAACTAGCCATCTCAACACCAGAGGAGCTGCACAAATTGACCCCGACTGGGTTGCTTACAATTCTCACTTCTCCTTCATCTGATAGTGATGGATCACAGTTGTTATCTATTGAAGAGTTAATAATACAAGGCAGCTCTGACCCAAAAGAGTTGCCTCAATCTCATGTGGTTCAATCAGACACTGCAGCTATACTTTACTCTTCAGGAACTACTGGGATGAGCAAAGGTGTAGTTTTGACTCATGCAAATGTCATTTCTATAATGAGATTACTCCAGTGGGCTGTAGATTTATCGGCATCACAAGATGATGTTTTCTTAGCCTTCATTCCAATGTTCCATGTTTATGGACTCATGTTCTTTGGCTTAGGCTTGTTGTGCAAGGGTGTAACAAGTGTACTAATGcagaaatttgatttcaaaactATGCTTGCTGCAATTGAGAAGCACAAAGTGAATAACATACCGGCCGTACCGCCGGTGATTCTTGCAATGGCAAAGCATGCAAGCAAAGCTGGATATGACTTGTCCAGCCTAAGAAGGGTGGGTTCAGGTGCTGCACCTTTGAGTAAAGAAGTGGCAAGGGAGTTCAGGCAGAGGTTTCCTTGGGTTGAGTTGAGGCCAGGCTATGGACTAACAGAAAGCTGTGGTGGAACAACTTTTTTTGTGTCAAGCAATGATGCTAAGGCAAGGCCAGACTCATGTGGGATGCTGCTTCCAACATTTTCTGCAAAAGTGGTGGACAATGAAACAGGAAAACCTTTGCCTCCTTTCAAAGAAGGAGAATTATGGCTGAAAAGTCCAACTGTTATGAAAGAATATCTGGGGAATTTGGACGCTACAACTGCAACATTTGACTCAGAGGGATGGTTGAAGACAGGTGATCTTGGATATATTGATGAAGATGGATTTGTCTATATAGTTGAACGAATTAAGGAGCTGATCAAGCATAACGGGTATCagGTAGCTCCTGCAGAACTGGAATCTGTATTGCTTAGTCATCCAATGATTCTTGATGCTGCTGTTATCCCggttgaagatgaagaaactgGACAGATACCAATGGCTTATGTGGTGAGAGCATCTGGTTCTGAGCTCACAGAAGACCAAGTTATTCAATTTGTTTCCAGTCAGGTGGCCCCATATAAGAAAGTAAGAAGGGTAAGTTTCATCAATGCAATTCCAAAGTCTGCTGCAGGCAAAATCTTGCGCAAGGATCTTGTCTCTCAGACCAAAAATCAACTTGCCTCCAAGTTGTG 1724 0.42 MSSEEAWPANVKESQKSVPSSDKRSGYDPKTGIYHCIVSLGPQQEIPIRPHLDTASLVLSQFPQPHLAETRIAFIDSTTNRHLSYGELRRSIFSLASSLYHGLGIKKGDVVFVLSPNSLLYPTICLAVLSIGAIFTTANPLNNPSEIAKQVRDSGAKLAISTPEELHKLTPTGLLTILTSPSSDSDGSQLLSIEELIIQGSSDPKELPQSHVVQSDTAAILYSSGTTGMSKGVVLTHANVISIMRLLQWAVDLSASQDDVFLAFIPMFHVYGLMFFGLGLLCKGVTSVLMQKFDFKTMLAAIEKHKVNNIPAVPPVILAMAKHASKAGYDLSSLRRVGSGAAPLSKEVAREFRQRFPWVELRPGYGLTESCGGTTFFVSSNDAKARPDSCGMLLPTFSAKVVDNETGKPLPPFKEGELWLKSPTVMKEYLGNLDATTATFDSEGWLKTGDLGYIDEDGFVYIVERIKELIKHNGYQVAPAELESVLLSHPMILDAAVIPVEDEETGQIPMAYVVRASGSELTEDQVIQFVSSQVAPYKKVRRVSFINAIPKSAAGKILRKDLVSQTKNQLASKL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00151 574 MobiDBLite consensus disorder prediction 1 24 - -
Bva04g00151 574 CDD 4CL 46 562 - -
Bva04g00151 574 SUPERFAMILY Acetyl-CoA synthetase-like 70 568 - -
Bva04g00151 574 Gene3D - 468 572 IPR045851 -
Bva04g00151 574 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 573 - -
Bva04g00151 574 Gene3D - 42 467 IPR042099 -
Bva04g00151 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 573 - -
Bva04g00151 574 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g00151 574 ProSitePatterns Putative AMP-binding domain signature. 220 231 IPR020845 -
Bva04g00151 574 Pfam AMP-binding enzyme 70 471 IPR000873 -
Bva04g00151 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00151 Bva-Chr4 947215 949301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00151 22 570 Monolignol Biosynthesis Gene Families AT1G20500 45.520 2.57e-161 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00151 K10526 - gmx:100783104 854.358