Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00148 ATGGCTTTGTCTTTCCCTTTccaattacttttctttctattccttTCCATTCCATTAATCCCATCGTCATCAGCTCAACCTCTAACTCTTGATTACTACGCCAAAACATGCCCCGACTTTGAAAGAACCGTGAGAGAAAACGTGTACACCAAGCAAAGCGCAGTCCCAGCCACCGCTGCCGGCGTTCTCCGCATGTTCTTCCACGACTGCATCACCGACGGCTGCGACGCCTCCATCCTCATCAGCTCCAACGCCTACAACAAGGCGGAGCGCGACGATGAGCTGAACCTCTCCCTCTCCGGAGACGCCTTCGACATCATCGTAAAGATCAAGAATGCCCTAGAACTCAGCTGCCCCGGCGTCGTCTCCTGCGCGGACATCATGGCACAGACAACCAGAGACCTCGTGAAGATGGTCGGTGGCCCATTTTATAAGGTTCCTCTCGGGAGAAAGGACAGCACCGTCTCAAACGTCAACAGAGTGGCGGCGAGCATTCCGACCCCGACCATGACCATGGACATGATCATTGAAAAGTTCACCTCAAAGGGTTTCACGGTCCAGGATATGGTTGCCCTAACCGGGGCCCACACCATCGGGTTCACCCACTGCAAGGAGTTCGCCAACCGGATCTTCAACTTCAGCGAGACCAACCCTGTCGACCCGACCCTTAGCCCAAAGCTTGCAGCCGGGTTGAGACAGGTCTGCGCCAACTACACCAACGATCCAGGCATGTCAGCATTCAACGATGTACGGTCACCAAGCAAATTCGACAATGCCTATTACCAGAATGTTCTTCGAGGTTTGGGGCTGTTGACCTCAGACGCAATGCTGGCCGTTGATCCAAGAACTAGGCCATTGGTTGAGCTGTATGCTAAGAATCAAGATGCGTTCTTTAAGGATTTTGCAATGGCAATGGAGAAGCTTTCATTGTTTGAGATTAAGACTGGTAACGGGGGAGAAGTAAGGAACAGGTGCGATCAGTTCAACAATCTTCCTTTGTA 1001 0.5105 MALSFPFQLLFFLFLSIPLIPSSSAQPLTLDYYAKTCPDFERTVRENVYTKQSAVPATAAGVLRMFFHDCITDGCDASILISSNAYNKAERDDELNLSLSGDAFDIIVKIKNALELSCPGVVSCADIMAQTTRDLVKMVGGPFYKVPLGRKDSTVSNVNRVAASIPTPTMTMDMIIEKFTSKGFTVQDMVALTGAHTIGFTHCKEFANRIFNFSETNPVDPTLSPKLAAGLRQVCANYTNDPGMSAFNDVRSPSKFDNAYYQNVLRGLGLLTSDAMLAVDPRTRPLVELYAKNQDAFFKDFAMAMEKLSLFEIKTGNGGEVRNRCDQFNNLPL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00148 333 Gene3D Peroxidase, domain 2 166 308 - -
Bva04g00148 333 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Bva04g00148 333 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Bva04g00148 333 SUPERFAMILY Heme-dependent peroxidases 28 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601|GO:0042744
Bva04g00148 333 Pfam Peroxidase 55 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 PANTHER - 9 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g00148 333 Gene3D - 31 329 - -
Bva04g00148 333 PANTHER PEROXIDASE 41 9 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00148 Bva-Chr4 930939 932374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00148 7 330 Peroxidase AT1G24110 57.538 1.39e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00148 K00430 - gmx:100795676 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00148 04 930939 932374 Bva04g00148 04 930939 932374 ECH
Bva03g02223 03 19444570 19445820 Bva04g00148 04 930939 932374 ECH
Bva11g01090 11 12264574 12265943 Bva04g00148 04 930939 932374 ECH