Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00134 ATGGCTCTACCACTCCACTGCCCCTGTTCCACTCTTTCACCACCACGTTCTTTTCTCACATCATCGTCTTCTAATTGCTATTCATTCAGACTCCCCGCCCTCCGCCCCCGGCGATGTTACCCTTGTGTGAGGACCACCCTATCCACATCTGATGCTTCGAAAGGTGAGAAGAAGCTCCTCCTTGAAGTCAAGGATCTCAGGGCCAAGATTGTAGAATCCAATGTGGAGATCCTTAATGGTGTTAATATCGTTGTCAACGAAGGAGAGGTTCATGCCATTATGGGAAAGAACGGCTCTGGAAAGAGCACATTTGCGAAGGTTCTTGTTGGCCATCCAGATTATGAAGTTACTGGAGGCAGTGTTATGTTCAAAGGCGAGAATTTGCTTGATATGGAACCAGAGGAAAGATCACTTGCCGGTCTTTTTATGAGCTTCCAGTCCCCTGTGGAGATTCCAGGTGTTTCTAATGATGAATTTCTTGTTATGGCTTATAATGCTCGAAGAAGAAAACTTGGCCTGCCCGAGCTTGGACCACTTGAGTGCTTTTCTTACCTTATGGAGAAACTCCAACTTGTAAATATGAAGCCAGACTTTCTTAACAGAAATGTGAATGAAGGATTTAGTGGTGGTGAACGGAAGCGCAATGAAATTTTGCAGCTTGCGGTTTTGGGGGCTGACTTGGCTATTCTTGATGAAATTGATTCTGGATTGGATGTTGATGCACTGAGAGATGTCGCAAATGCTGTGAATCGGATTCTGACTCCAAAGAATTCTCTACTGATGATAACTCATTATCGTCGAATTCTGGATCTTTTAAATCCTACACATGTCCATGTTATGGACAAAGGGAAAATTGCAAGAACAGGCGACATATCTATGGTAGATGTTATTGAAACAAAAGGATATGAAACGGTATCAACTTG 923 0.4355 MALPLHCPCSTLSPPRSFLTSSSSNCYSFRLPALRPRRCYPCVRTTLSTSDASKGEKKLLLEVKDLRAKIVESNVEILNGVNIVVNEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVMFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVSNDEFLVMAYNARRRKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVANAVNRILTPKNSLLMITHYRRILDLLNPTHVHVMDKGKIARTGDISMVDVIETKGYETVST 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00134 307 Pfam ABC transporter 78 232 IPR003439 GO:0005524
Bva04g00134 307 TIGRFAM sufC: FeS assembly ATPase SufC 61 304 IPR010230 GO:0005524
Bva04g00134 307 Gene3D - 60 306 IPR027417 -
Bva04g00134 307 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 307 IPR003439 GO:0005524
Bva04g00134 307 SMART AAA_5 87 284 IPR003593 -
Bva04g00134 307 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524
Bva04g00134 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 291 IPR027417 -
Bva04g00134 307 CDD ABC_FeS_Assembly 61 302 IPR010230 GO:0005524
Bva04g00134 307 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 51 306 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00134 Bva-Chr4 852655 857069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00134 74 292 Calmodulin-binding Proteins AT2G36910 23.707 2.15e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00134 K09013 - gmx:100811883 420.624