Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00131 ATGTTGGCAATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAGGAGAATGCTTCTAATGGTGGGAATGTGCAGAGATCTAAAAGCTTCGCCTTTAGAGCTCCTCAGGAGAATTACACCATTCAGGAGTTTGAATTGGGCAAGATCTATGGTGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGGACTGTATATGCTTTGAAGATcatggacaaaaaatttattactaaagaGAACAAAACAGCTTATGTGAAGTTGGAACGCATAGTACTTGATCAATTGGACCATCCTGGCATTGTGCGGctgtttttcacttttcaagaTTCATTTTCTCTGTACATGGCACTTGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAAATAACCAGGAAAGGTCGTCTGtctgaagaagaagcaagGTTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGATTAATACATCGTGATATTAAGCCCGAGAACTTGTTACTTACGGCTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTGAAGCCAATGCAGGACAGCCAAATCACAGTTCTTCCAAATGCAGCATCAGaTGATAAAGCCTGCACGTTTGTGGGTACGGCTGCTTATGTACCTCCAGAGGTTCTGAATTCTTCACCGGCAACTTTTGGAAATGACCTCTGGGCACTAGGATGCACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCTAGTGAATGGCTCATTTTTCAAAGAATTATAGCCAGAGATATACGGTTTCCAGATTACTTTTCTGACGAAGCAAGGGACCTAATTGACCGCTTATTGGATCTGGATCCCATCAGGAGACCTGGTGCAGGACGGGATGGTTATGCTGCTTTGAAAATGCATCCCTTTTTCAAGGGAGTCGACTGGAATAACTTAAGGGCACAAACCCCTCCCAAACTTGCTCTGGAACCAGGGgCTCCGTCTCCTGAGAGTGATGATATTCAGGATTCAGCTTGGAATCCTAATCACATAGGGGATGGTTCTGCTAGATACCCTGATGGAAATACTGGTGCTGCATCATCTTCTGAAGGCACGGGTCACGTTACTAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAATCTGTTCTTATGATCTCAACGGTGAAGAAAATCcagaaaataacaaacaagAAGGTGCAGCTCATCCTTACAAACAAGCCGAAGTTGATCTATGTGGACCCATCAAAACTAATTCTGAAGGGAAATATAATATGGTCAGATAATCCGAATGATTTAAACATCCAAGTTACCAGTCCTTCACATTTCAAGATTGTCACACCTAAAAAGGTGTTGTCGTTTGAGGATGCAAAGCAAAGAGCGTCGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTG 1469 0.4037 MLAMEKDFDSKLRIQENASNGGNVQRSKSFAFRAPQENYTIQEFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDSFSLYMALESCEGGELFDQITRKGRLSEEEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDRLLDLDPIRRPGAGRDGYAALKMHPFFKGVDWNNLRAQTPPKLALEPGAPSPESDDIQDSAWNPNHIGDGSARYPDGNTGAASSSEGTGHVTRLASIDSFDSKWQQFLEPGESVLMISTVKKIQKITNKKVQLILTNKPKLIYVDPSKLILKGNIIWSDNPNDLNIQVTSPSHFKIVTPKKVLSFEDAKQRASQWKKAIEGLQNR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00131 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Bva04g00131 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Bva04g00131 489 SUPERFAMILY Protein kinase-like (PK-like) 41 358 IPR011009 -
Bva04g00131 489 Gene3D Transferase(Phosphotransferase) domain 1 128 324 - -
Bva04g00131 489 Pfam PH domain 386 488 IPR033931 -
Bva04g00131 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bva04g00131 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 485 - -
Bva04g00131 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 485 - -
Bva04g00131 489 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00131 489 SUPERFAMILY PH domain-like 305 488 - -
Bva04g00131 489 Gene3D - 363 489 IPR011993 -
Bva04g00131 489 Coils Coil 469 489 - -
Bva04g00131 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00131 489 MobiDBLite consensus disorder prediction 325 372 - -
Bva04g00131 489 Pfam Protein kinase domain 46 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00131 Bva-Chr4 823904 829444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00131 1 489 AGC Kinase Gene Family AT3G10540 83.130 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Bva04g00131 Pkinase 4.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00131 K06276 - qsu:112026659 871.692