Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00128 ATGATATCTTCAGGGATGAACTTGGTGATGACTGTCATTGGTTTCGTGGTGAGCACCATGTTTATCATTTTCGTTTGCACAAGACTCATTTGTGCTCGAATTCACTTGAATGCTTCCGGGAGATCCTTCCCTATTATTGCTTCCAGATCCCATCTCAGTCTGCTCGAACGGGGTTTTCATGGTCTTGAGCCCGTAGCTGTAGCAAACTTTCCAACGAAGAAGTACAGTGACGAATTTTTTTCTGGGGCAGAGGATTATCGATGCACAGTCTGCCTTTCGGATTACCATGGTGAAGATATATTGCGTATCCTCCCCTATTGTGGACACTCCTTCCATATGACCTGCATAGACATATGGCTGCACCAACATTCTACTTGTCCTGTTTGTCGAATATCATTGCGTGAATTCCCTGAGAGAAAGCGCTTTATGCAACCCTTGTTCAGCTCTGCAATTCGATCTCAGTATGGGATGGAATCCTTTGATTCCCACTCATATCACTGTATGGTGACTGATAATGGTTTGTCATCAAGAATACAGGACAACCATGGGGTTAACCCTGTGGAGGAGGGTCATTTTGCAGCTGAGTGTGGTGGAGTGGTTGCTCTGGAGAATCCCACAAACTCAAGTCATGGTGATCAGATCATTAAAGATGCAGAAAACAAGCATGTAGAGAGCCCATCAAATCTGTG 689 0.447 MISSGMNLVMTVIGFVVSTMFIIFVCTRLICARIHLNASGRSFPIIASRSHLSLLERGFHGLEPVAVANFPTKKYSDEFFSGAEDYRCTVCLSDYHGEDILRILPYCGHSFHMTCIDIWLHQHSTCPVCRISLREFPERKRFMQPLFSSAIRSQYGMESFDSHSYHCMVTDNGLSSRIQDNHGVNPVEEGHFAAECGGVVALENPTNSSHGDQIIKDAENKHVESPSNL 229
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00128 229 Pfam Ring finger domain 88 130 IPR001841 -
Bva04g00128 229 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Bva04g00128 229 PANTHER OS11G0150450 PROTEIN 1 228 - -
Bva04g00128 229 SUPERFAMILY RING/U-box 81 136 - -
Bva04g00128 229 SMART ring_2 88 129 IPR001841 -
Bva04g00128 229 MobiDBLite consensus disorder prediction 207 229 - -
Bva04g00128 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 135 IPR013083 -
Bva04g00128 229 CDD mRING-H2-C3H2C2D_ZSWM2 88 130 - -
Bva04g00128 229 PANTHER OS11G0150450 PROTEIN 1 228 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva04g00128 Bva-Chr4 806844 809893 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00128 13 137 C3H Transcription Factor Family AT4G10150 35.156 1.59e-19 82.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00128 - - aprc:113873018 356.681