Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva04g00128 | ATGATATCTTCAGGGATGAACTTGGTGATGACTGTCATTGGTTTCGTGGTGAGCACCATGTTTATCATTTTCGTTTGCACAAGACTCATTTGTGCTCGAATTCACTTGAATGCTTCCGGGAGATCCTTCCCTATTATTGCTTCCAGATCCCATCTCAGTCTGCTCGAACGGGGTTTTCATGGTCTTGAGCCCGTAGCTGTAGCAAACTTTCCAACGAAGAAGTACAGTGACGAATTTTTTTCTGGGGCAGAGGATTATCGATGCACAGTCTGCCTTTCGGATTACCATGGTGAAGATATATTGCGTATCCTCCCCTATTGTGGACACTCCTTCCATATGACCTGCATAGACATATGGCTGCACCAACATTCTACTTGTCCTGTTTGTCGAATATCATTGCGTGAATTCCCTGAGAGAAAGCGCTTTATGCAACCCTTGTTCAGCTCTGCAATTCGATCTCAGTATGGGATGGAATCCTTTGATTCCCACTCATATCACTGTATGGTGACTGATAATGGTTTGTCATCAAGAATACAGGACAACCATGGGGTTAACCCTGTGGAGGAGGGTCATTTTGCAGCTGAGTGTGGTGGAGTGGTTGCTCTGGAGAATCCCACAAACTCAAGTCATGGTGATCAGATCATTAAAGATGCAGAAAACAAGCATGTAGAGAGCCCATCAAATCTGTG | 689 | 0.447 | MISSGMNLVMTVIGFVVSTMFIIFVCTRLICARIHLNASGRSFPIIASRSHLSLLERGFHGLEPVAVANFPTKKYSDEFFSGAEDYRCTVCLSDYHGEDILRILPYCGHSFHMTCIDIWLHQHSTCPVCRISLREFPERKRFMQPLFSSAIRSQYGMESFDSHSYHCMVTDNGLSSRIQDNHGVNPVEEGHFAAECGGVVALENPTNSSHGDQIIKDAENKHVESPSNL | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva04g00128 | 229 | Pfam | Ring finger domain | 88 | 130 | IPR001841 | - | |
Bva04g00128 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 130 | IPR001841 | - | |
Bva04g00128 | 229 | PANTHER | OS11G0150450 PROTEIN | 1 | 228 | - | - | |
Bva04g00128 | 229 | SUPERFAMILY | RING/U-box | 81 | 136 | - | - | |
Bva04g00128 | 229 | SMART | ring_2 | 88 | 129 | IPR001841 | - | |
Bva04g00128 | 229 | MobiDBLite | consensus disorder prediction | 207 | 229 | - | - | |
Bva04g00128 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 135 | IPR013083 | - | |
Bva04g00128 | 229 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 88 | 130 | - | - | |
Bva04g00128 | 229 | PANTHER | OS11G0150450 PROTEIN | 1 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva04g00128 | Bva-Chr4 | 806844 | 809893 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva04g00128 | 13 | 137 | C3H Transcription Factor Family | AT4G10150 | 35.156 | 1.59e-19 | 82.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva04g00128 | - | - | aprc:113873018 | 356.681 |