Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00125 ATGGCTGATGAGTTTGGGCATTGGAAGGGGCAAGCGTCGTTCAGAAGTTGGGCGAAGCACACTGAGGAGAGCTACCAGCTGCAGCTGGCTCTGGCGCTTCGTCTTTCGGCACAATCCGCTTCTGCAGATGATCCCAATTTCTTGGATTTGGAACCCAGTTCGTCTTCCAATTCGGCTGAAGCAGTGTCGCATCGATTCTGGGTAAATGGTTGTTTGTCATACTCGGACAAAATTCTGGATGGTTTTTATATAATCCACGGGATGGATGTATATGCTTGGACTATGAGTACTGATCTGCAGAACAATGGTCGGATTCCATCATTTGAATCACTTATGTCAATTGAACCTTGCGATGATTTGTCAGTTGCAGTGGTTGCTATTGATAAATCTAGGGATCCTCGTTTGAGAGAACTGCAAAGTAGAGTAGTCAGTCTTTCTTGTAATTGGACAACCACAAAAGATGTAACCGATCAGCTGGCCAAAATCGTTTGTAGTAGGATGGGGGGTGCAGTTACAACCGAGGAAACTTTAGGTATGCGATGGAAGGAGTGCACTCAATATCTAAAAGCCTGCCTGAATTCTGTGATTCTTCCAATTGGAAGCTTACCTGTTGGGCTTTGTGTCCATCGAGCATTGCTGTTTAAAGCATTAGCTGACTTAGTCAACCTACCATGCCGAATTGCTAGGGGCTGCAAGCATTGTGGGAAGGATGTTGGTGCCTCATGCGTTGTGCAATTTGGTCCTGACAGGGAGTATTTGATTGATCTGGTTGGGAGGCCAGGGGCAATGAGTCAGCCAGATTCTTCCCTAAATTCTGCACCTTCAATATTGAATTCTTCACCGCTGTGCCATCCAAAGTTCAAACCAGTTGAAGCTGTTGAATATACGAAAACATTGGCCCAATTATATTTCCTGGACTGTCAAGCGCTTCACCTTGTGTTTGATAGCAAGTCAGGTAGTCCTGTTGATCATGGTGACAAAATGGGTATAAAGCCTACTGAAGCTTTGCCTGCAAACTATGCTGTTGTGAATAACCAGTTGCCTGCTTTAGGTTCTCATGCAGCAGAATACTCGGCACTTGGTGAAGCAAACGAGTCAGTAATGAATGGTCCAAATCATGaagttgattttgatgaggaAGATCTGGATATTCCATGGAGTGAACTTAATTTGAAGAACATAATTGGAACAGGGTCATTTGGAACTGTCCTTCGTGCAGACTGGCGTGGTTCTgAAGTTGCTGTGAAAATTCTTAAGGTTCAAGGttttgatgaagaaaaatttgaagaatttttaaagGAGGTCTCACTCATGAAGCGTTTACGGCATCCGAATGTTGTACTTCTAATGGGCGCAGTCATTCAGCCCCCGAACTTGTCCATAGTGACAGAATATTTATCAAGGGGCAGCTTGTACGAACTTCTCCGCTTGCCGGATGCCAGATCAGCACTCAGTGATAGGCGTTGTCTAAGTATGGCTTATGATGTGGCTAATGGAATGAATTATCTTCATCAAATGAGACCTCCAATTGTTCATAGAGATTTGAAATCTCCAAATCTTTTGGTGGATGATACATATACAGTTAAGGTATGTGATTTTGGCCTCTCGCGTTCAAAGGCAAACACATTTCTTTCATCTAAAACAGCTGCTGGGACTCCTGAGTGGATGGCACCAGAAGTCATCCGTGGTGAAgcatcaaatgaaaaatgcgATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTCATGACCCTACAACAACCTTGGAAAAACTTAAATCCTTCTCAGGTTGTAGCAGCTGTTGGCTTTATGGACAAAAGGCTAGAGATTCCAAGCTATGTGAATCCTCAAGTGGCTTCCCTGATTGACCTCTGTTGGGTTAATGATCCCCGGAGACGCCCTTCTTTCTCCAATATCATGAAATATTTGCAGCAAATAATGACCGATGTTAAAAGCTCAACAAGTTCATACCAATG 1976 0.4256 MADEFGHWKGQASFRSWAKHTEESYQLQLALALRLSAQSASADDPNFLDLEPSSSSNSAEAVSHRFWVNGCLSYSDKILDGFYIIHGMDVYAWTMSTDLQNNGRIPSFESLMSIEPCDDLSVAVVAIDKSRDPRLRELQSRVVSLSCNWTTTKDVTDQLAKIVCSRMGGAVTTEETLGMRWKECTQYLKACLNSVILPIGSLPVGLCVHRALLFKALADLVNLPCRIARGCKHCGKDVGASCVVQFGPDREYLIDLVGRPGAMSQPDSSLNSAPSILNSSPLCHPKFKPVEAVEYTKTLAQLYFLDCQALHLVFDSKSGSPVDHGDKMGIKPTEALPANYAVVNNQLPALGSHAAEYSALGEANESVMNGPNHEVDFDEEDLDIPWSELNLKNIIGTGSFGTVLRADWRGSEVAVKILKVQGFDEEKFEEFLKEVSLMKRLRHPNVVLLMGAVIQPPNLSIVTEYLSRGSLYELLRLPDARSALSDRRCLSMAYDVANGMNYLHQMRPPIVHRDLKSPNLLVDDTYTVKVCDFGLSRSKANTFLSSKTAAGTPEWMAPEVIRGEASNEKCDVFSFGVILWELMTLQQPWKNLNPSQVVAAVGFMDKRLEIPSYVNPQVASLIDLCWVNDPRRRPSFSNIMKYLQQIMTDVKSSTSSYQ 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00125 658 Gene3D Transferase(Phosphotransferase) domain 1 468 657 - -
Bva04g00125 658 PRINTS Tyrosine kinase catalytic domain signature 504 522 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PRINTS Tyrosine kinase catalytic domain signature 570 592 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PRINTS Tyrosine kinase catalytic domain signature 614 636 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PRINTS Tyrosine kinase catalytic domain signature 463 476 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PRINTS Tyrosine kinase catalytic domain signature 551 561 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 333 - -
Bva04g00125 658 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 11 333 - -
Bva04g00125 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 364 653 - -
Bva04g00125 658 Pfam Ethylene-responsive protein kinase Le-CTR1 59 263 - -
Bva04g00125 658 CDD STKc_MAP3K-like 395 643 - -
Bva04g00125 658 ProSiteProfiles Protein kinase domain profile. 389 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00125 658 Pfam Protein tyrosine and serine/threonine kinase 389 643 IPR001245 GO:0004672|GO:0006468
Bva04g00125 658 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 364 653 - -
Bva04g00125 658 SUPERFAMILY Protein kinase-like (PK-like) 373 643 IPR011009 -
Bva04g00125 658 ProSitePatterns Protein kinases ATP-binding region signature. 395 416 IPR017441 GO:0005524
Bva04g00125 658 Gene3D Phosphorylase Kinase; domain 1 382 467 - -
Bva04g00125 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Bva04g00125 658 SMART serkin_6 389 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00125 Bva-Chr4 790917 797233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00125 17 647 MAP Kinase Kinase Kinase AT5G03730 58.537 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva04g00125 PK_Tyr_Ser-Thr 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00125 K14510 - gmx:100807496 984.171