Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00120 ATGGCAGCGCCGAAATCGTGCAGTAGTCGATCAACGTCTCTGAGGGATGCCTCTGACTGTGGGTCTCCCAAGATGGAGGGCACCGATAGCTGGGACGCTCTTGAATGGACCAAGATAGAGTCCATTCCTCGCTATGTCTcgctttcaaattttgaattcttacTTGAGGAAGAGCAAGTCGTAGCCGAAGGACACGGTGTTGTTCTTGTAAATACAGATGAAGCAGGTTCTTTGATAGTTACAAACTTTCGTCTTCTTTTTCTGAGTGAGGGAACTAGAAATGTTATTGCTCTTGGAACAATACCACTGGCAACTATTGAGAAGTTTAACAAGATTGTTGTGAAGGTTCAGTCAAATACTCGTCAATTGGACAAGACGCCACCAAGAAGACTGCTCCAGGTCATTGGAAAAGATATGAGAATTATTGTCTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGTGATATTTGATGCGTTACTGAGGTGTACCAAGCCAGCAAGGCTATGGGATCTGTATGCTTTTTTACCTGGACTTTCTAAGTTTAGTAACACTAATCCAAAGGTGCGCTTACTGGGTGAGTATTTTCGGATGCTTGGAAAAAGCTCTTATCATGTATCAATGTATATGATTGAACGTGGGTCCTTTACCTTGTCCAATGACTTGTGGAGAATAAGTAGGGTAAATTCCAACTATACAATGTGCCAGAGTTATCCATTTGCTTTGATTATTCCAAAGAGCATCAGTGATAATGAAGTACTCCAAGCTTCCAGCTTTCGGGCAAGAGGCCGGCTGCCTGTAGTTTCTTGGTGTCATCCTGGTACTGGAGCAGTCCTTGCACGGTCATCCCAACCCTTAGTTGGTATGATGAATATGAGGAGCAACACGGATGAAAAGCTTGTGGCTGCACTTTGTGGCAAACTTGAAGATGGCTCCCGGAGGAAGCTATATATTGCTGATGCTAGACCAAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGCGGTTCAGAATCATCATCAAATTACTTCCAATCTGAGGTAGTTTTCTTTGGGATAGACAACATCCATGCAATGAGAGATAGCTTTGCTCGGCTCAGAGAATACTTAGATACTCATGGCAGAACATCATCTGATGGAATGTCATCATTTTTGAGACATGGTGGGTGGACATGGGGTGGAGGCAATCTGAGTAGTATGTCTGCTTCAGTATTAACCCTTGGGGACAGTGGATGGTTGCTGCACATTCATAGTGTCTTGGCTGGTTCAGCCTGGATTGCTGCTCGTGTTGCTATGGAAACGGCTTGTGTGCTTGTACACTGCAGCGATGGATGGGATAGAACATCTCAGTTGGTTTCACTGGCCAATTTATTGCTTGATCCATACTATCGCACAATTGCAGGGTTTCAGGCACTTGTTGAAAAGGACTGGCTAGCATTTGGTCATCCATTTTCGGATCGTGTGGGAATGCCTTCTGTCTGTTCAAGTGGATATGAGTTACCTAGGCAATCTTCTACTGGAAGTTTCCCGTCATCACCCATGCGCCAATCATCAGGAACCTTCACCTCTCAAACTCCCACTTCTTCTCATGGACAGACTTCAAACCATTACTCTCCTATTTTTTTGCAATGGATTGATTGTGTTTCACAATTGTTACGGATGTATCCTTCTGCTTTTGAGTTCTCCTCGGCTTTCCTGGTGGACTTCTTAGACTGTGTGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAATAGtGAAAAAGAGAGGCAGCAGTACAATGTTTTTGAAGCCTGTGGATGTATGTGGCCTTATTTGGCTGATTTGCGTGCTTCAGAAGGAGTTTCCCATGTGCATTATAATGTCTTTTATGAACCTTCAAAGTACAACGGTCCTCTTCTGCCACCTGCAGCAGCTTTAGCCCCGACTTTGTGGCCCCAATTCCATCTTCGTTGGGCATGCCCACTTGAAGCTCAGGCCGGGGAGATTGAAGCGCATTGTAGGAAGATGGCTTTGAAAAACTCTGAGATGCACAAGGCAAAAGAATTGGCCGAAAGGAATGCTAAAGAAATTACAATTGCCATGGAATCACTGAGTGTAGAATTCCAAAATGAGAAGCAGCTGGGCAGCTCAGCTAGGAACATGGCCAAGAGgacaagcaaagaaaatatggcCATAAAGCGAGCAATTCAATCATTAGGGTACAAGGTTCACTTTCCTGGCAGCGGCGATTGTGTTGTTGACATCGAAAGCAATCCAGTGGGGCCCTTACAAAACTTCATCTATGCTTCCTCCAAAAAAGATTCAGATGGTTCTGAGCATGACAAGAGACAGGATCTGTGTAATTCAGCAACCACCATGGAAGGTGATAATGTCTTCAGTAGAGTTTGTGAAAATCTATGCCCATATCGTGCTCGCGATGGAGGTTGCCGGTGGCCGAATGCAGGTTGTGCTCAACTGCGTAGCCAATTTGTTGGTCTCAGGGCAAATTTTGATGCTATCGACCAACTTTCAATTAATGACAGTTATTTCAAGTCTGAGTA 2540 0.4382 MAAPKSCSSRSTSLRDASDCGSPKMEGTDSWDALEWTKIESIPRYVSLSNFEFLLEEEQVVAEGHGVVLVNTDEAGSLIVTNFRLLFLSEGTRNVIALGTIPLATIEKFNKIVVKVQSNTRQLDKTPPRRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRCTKPARLWDLYAFLPGLSKFSNTNPKVRLLGEYFRMLGKSSYHVSMYMIERGSFTLSNDLWRISRVNSNYTMCQSYPFALIIPKSISDNEVLQASSFRARGRLPVVSWCHPGTGAVLARSSQPLVGMMNMRSNTDEKLVAALCGKLEDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEVVFFGIDNIHAMRDSFARLREYLDTHGRTSSDGMSSFLRHGGWTWGGGNLSSMSASVLTLGDSGWLLHIHSVLAGSAWIAARVAMETACVLVHCSDGWDRTSQLVSLANLLLDPYYRTIAGFQALVEKDWLAFGHPFSDRVGMPSVCSSGYELPRQSSTGSFPSSPMRQSSGTFTSQTPTSSHGQTSNHYSPIFLQWIDCVSQLLRMYPSAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQYNVFEACGCMWPYLADLRASEGVSHVHYNVFYEPSKYNGPLLPPAAALAPTLWPQFHLRWACPLEAQAGEIEAHCRKMALKNSEMHKAKELAERNAKEITIAMESLSVEFQNEKQLGSSARNMAKRTSKENMAIKRAIQSLGYKVHFPGSGDCVVDIESNPVGPLQNFIYASSKKDSDGSEHDKRQDLCNSATTMEGDNVFSRVCENLCPYRARDGGCRWPNAGCAQLRSQFVGLRANFDAIDQLSINDSYFKSE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00120 846 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 20 845 - -
Bva04g00120 846 PANTHER MYOTUBULARIN-RELATED 20 845 IPR030564 -
Bva04g00120 846 MobiDBLite consensus disorder prediction 499 533 - -
Bva04g00120 846 Gene3D - 65 164 IPR011993 -
Bva04g00120 846 SMART gram2001c 43 113 IPR004182 -
Bva04g00120 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Bva04g00120 846 ProSiteProfiles Myotubularin phosphatase domain. 200 648 IPR010569 -
Bva04g00120 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 206 652 IPR029021 -
Bva04g00120 846 MobiDBLite consensus disorder prediction 1 18 - -
Bva04g00120 846 Coils Coil 680 700 - -
Bva04g00120 846 Pfam Myotubularin-like phosphatase domain 214 590 IPR010569 -
Bva04g00120 846 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g00120 846 SUPERFAMILY PH domain-like 54 176 - -
Bva04g00120 846 CDD PTP-MTM-like 263 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00120 Bva-Chr4 755955 771311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00120 1 844 Protein tyrosine phosphatase (PTP) family AT3G10550 68.787 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00120 K18081 - gmx:100781842 1298.11