Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00104 ATGAGGAAGCGTCAAGTAGTTGTGAGAAGAGAGGAACCGTCAAGAAGCCAAGAGAATTCTTCTTTCACCGTCAGGAGTGTGAGATATGGAGAGTGCCAAAAGAATCATGCTGCAAATGTTGGAGGATATGCCGTTGATGGTTGCAGGGAGTTCATAGCAAGTGGAGAGGAAGGTAATGCTGCTCTGACTTGTGCTGCCTGTGGCTGCCACAGAAACTTCCACAAAAGAGAGGTGGATGCTGAGGTAGTGTCTGAGTGCTCTACTCCTCCCTCCAACGCCAATTG 284 0.4894 MRKRQVVVRREEPSRSQENSSFTVRSVRYGECQKNHAANVGGYAVDGCREFIASGEEGNAALTCAACGCHRNFHKREVDAEVVSECSTPPSNAN 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00104 94 MobiDBLite consensus disorder prediction 1 20 - -
Bva04g00104 94 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 28 78 IPR006456 -
Bva04g00104 94 MobiDBLite consensus disorder prediction 1 16 - -
Bva04g00104 94 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 91 - -
Bva04g00104 94 PANTHER MINI ZINC FINGER PROTEIN 6 91 - -
Bva04g00104 94 Pfam ZF-HD protein dimerisation region 27 78 IPR006456 -
Bva04g00104 94 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 77 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00104 Bva-Chr4 665037 665321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00104 1 94 Zinc finger-homeobox gene family AT3G28917 70.000 8.40e-41 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva04g00104 ZF-HD_dimer 3.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00104 - - tcc:18601512 166.777