Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00099 ATGGGAACGTATGAGTTAAGTGCCTTCTTCCTCTGTGTTTCTCTATGCTTTTGTTTGTGTCCAATTGTGTTGTGTCAGTTATCAGAAAGCCAAACAAACACCATGAACCGTCTCCGTGACCTTCTTAATGGCTCTGTTACGTTGAATAGCGCCCCAGACTCGAATCCATGTACATGGAAGGGAGTCACTTGTGACTCCTCAAATTCCTCTGTAATCAAAATTTCTCTATCTGGGCTTTCACTTTCCTCCCCTAATTTTCTGTCTCTTCTATGCCAAATTGATACTTTGCAGCATGTTGATGTCTCTAATAACCATTTGAGCTCAATCCCAAATCAGTTCTTCACTGATTGTGGAAAGAATGAAAGGTTAAAGctgttaaattttagtttaaatagtTTGGTTGGCCCTCTACCTACTTTTCAAGGATTTCATGGCTTGGAATCCCTGGACATGTCTTTCAATTACTTATCATGGAATATTGGGTCACAGTTAGATGAACTGGTTAGCCTCAAAAGTTTGAATCTTTGCACCAATCACTTCAATGGGTCTCTTCCTACCAGCCTTGGGAATTCTATGGCTTTGGAGGAGCTTGTGCTTTCTAGGAATCATTTTGAAGGTGGAATCCCTGAGAAAATGTtgacttataaaaatttgaatgtcATTGATCTTAGTGAAAATAATCTTATAGGGTCTGTTCCTAGTGATATTGGAAATCTATCCAaattggaattttttattctttcctcTAATGACTTCAACGGCGAAATCCCCAAAACCCTCGGGAATATCTCAACCCTCAAACGTGTTGCTGCACATCAGAACAATTTTATTGGTGTCATTCCTCCTGGAATAACTCCATTTCTCAGGAGTTTGGATCTTAGTTACAATAACTTGTCTGGGACTATTCCAGCCGACCTTTTGTCATCATCAAATTTGGAGTCTGTAGATTTGTCCTATAATGCTTTATCTGGTCCATTACCCACAAATATTTCTTCTAGCCTAGTCAGGTTGAGGTTAGGGCGCAATTCACTAAATGGGACAATTCCTTCAGCAACTTTGGCaacacttgagagtttgaCGTACATGGAGCTGGAAAACAATAGATTAACAGGATCCATACCACGCCAACTGGGTTCATGCAGAAATTTAGCATTGTTGGATTTGGCTCAGAATGAATTGTCTGGGGAATTGCCCGCAGAACTTGGTAATCTTGCCAATCTTCAAGTCTTGAAACTACAAATGAACCACTTTTCTGGACTAATACCAATTCAAATCACCCAATTACAGAGTTTGTCAACGCTAAACCTGAGCTGGAATTATCTGGAAGGGCCAATTCCATCTGAAATATCAAGATTGGAAAAGCTCACTCTCCTGAACTTGCAAGGAAATAAACTGACTGGTTCTATTCCGACATCCATCAGCAGCTTGACTTATCTCATGGAAGTCCAACTTGGGGGAAACCAGCTAAGTAATGACATTCCAAAAATGCCACGGACTCTACAGATTGCCTTGAATCTCAGTAGCAACCTCTTTAAAGGACCTATTCCTAGCAGCTTTGATAATTTGCACAGCCTAGAAGTCCTGGATCTTTCGAATAACCAATTTTCTGGTGAAATTCCTGAATTCCTAACCAAATTGGAAACTTTGACGCTGTTGGTGCTTTCTAACAATCAACTATCTGGTGTCATTCCTAACTTTCACCCATGGGTTAGAGTTGTCAAAGATGGAAATGAAGATATAAAGAACAACACGCCCAACGCTTACCAACACTCAGCAAAGAAGGGAAAATCTGTTGTTGTGGCATTTCTTGTCGCACTCGCAGCAGCTGTTTTTGTTATTGGTGTGGCTGCTCTGCTGGTTGTTTCAATCTCACGACACTATCACAGGATTAATGATGAGAACTCGCAGTCAGGCGAGGATCTTCACCCTCCTCAGGTTGTCCAAGGCAATCTATTTACACCAAATGGAATTCACAGATCAAACATCGACTTCTCCAAAGCCATTGAAGCTGCTGGTGAGACATCAAATGTTACTTTGAAAACAAGGTTCTCAACTTACTACAAAGCAATCATGGCATCTGGAGCTACCTACTTTGTAAAGAAGCTTAATTGTGGTGACAAGATTTTCCCACTGGGTAGTCGTGATAAATTTGGGAAAGAGCTAGAGATCTTGGCAAAATTGAACAATTCAAATATCATGGCTCCTTTAGGCTATGTTCTCTCCACTCAGAGTGCTTATATACTGTATGAATTTGTGTCAAATGGCTCCCTTTATGATGTTCTTCATGGCAGCATGAGAAATTCGTTAGATTGGGCTAGCAGATATAGCATAGCTGTTGGTGTAGCTCAAGGTCTCTCTTTTCTGCATGGATATGCCTCTGGTCCATTACTTCTCCTAGACCTGTCAAGCAAAAGTATCATGCTGAAGTCCCTCAAGGAGCCTCTTGTTGGAGACATTGAACTCTATAAGGTGATTGATCTCACAAAGAGCACAGGAAGCTTTTCTGCAGTCGCTGGTTCTGTTGGCTATGTTACTCCTGAATACGCTTACACAATGAGAGTAACAATGGCTGGGAATGTCTACAGCTTTGGAGTGATTCTACTAGAACTGCTAACGGGAAAACCACCGGTAACTGAGGGAACTGAATTGGTCAAGTGGGTGTTGCGCTACTCAGCAAAGCAGGATCACATTCTTGATTTTAATGTCAGTGGAGCATCACAGGCTGTCAGAAATCAGATGCTTGCAGTCCTGAGGATTGCTCTTACCTGTGTTAGTACTTCGCCAGATTCAAGACCAAAGATGAAGAGTGTGCTGCGGATGCTCTTGAATGCAAGATA 2837 0.405 MGTYELSAFFLCVSLCFCLCPIVLCQLSESQTNTMNRLRDLLNGSVTLNSAPDSNPCTWKGVTCDSSNSSVIKISLSGLSLSSPNFLSLLCQIDTLQHVDVSNNHLSSIPNQFFTDCGKNERLKLLNFSLNSLVGPLPTFQGFHGLESLDMSFNYLSWNIGSQLDELVSLKSLNLCTNHFNGSLPTSLGNSMALEELVLSRNHFEGGIPEKMLTYKNLNVIDLSENNLIGSVPSDIGNLSKLEFFILSSNDFNGEIPKTLGNISTLKRVAAHQNNFIGVIPPGITPFLRSLDLSYNNLSGTIPADLLSSSNLESVDLSYNALSGPLPTNISSSLVRLRLGRNSLNGTIPSATLATLESLTYMELENNRLTGSIPRQLGSCRNLALLDLAQNELSGELPAELGNLANLQVLKLQMNHFSGLIPIQITQLQSLSTLNLSWNYLEGPIPSEISRLEKLTLLNLQGNKLTGSIPTSISSLTYLMEVQLGGNQLSNDIPKMPRTLQIALNLSSNLFKGPIPSSFDNLHSLEVLDLSNNQFSGEIPEFLTKLETLTLLVLSNNQLSGVIPNFHPWVRVVKDGNEDIKNNTPNAYQHSAKKGKSVVVAFLVALAAAVFVIGVAALLVVSISRHYHRINDENSQSGEDLHPPQVVQGNLFTPNGIHRSNIDFSKAIEAAGETSNVTLKTRFSTYYKAIMASGATYFVKKLNCGDKIFPLGSRDKFGKELEILAKLNNSNIMAPLGYVLSTQSAYILYEFVSNGSLYDVLHGSMRNSLDWASRYSIAVGVAQGLSFLHGYASGPLLLLDLSSKSIMLKSLKEPLVGDIELYKVIDLTKSTGSFSAVAGSVGYVTPEYAYTMRVTMAGNVYSFGVILLELLTGKPPVTEGTELVKWVLRYSAKQDHILDFNVSGASQAVRNQMLAVLRIALTCVSTSPDSRPKMKSVLRMLLNAR 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00099 945 Gene3D Ribonuclease Inhibitor 287 583 IPR032675 -
Bva04g00099 945 Gene3D Transferase(Phosphotransferase) domain 1 752 945 - -
Bva04g00099 945 PRINTS Leucine-rich repeat signature 288 301 - -
Bva04g00099 945 PRINTS Leucine-rich repeat signature 522 535 - -
Bva04g00099 945 Pfam Leucine rich repeat 504 559 IPR001611 GO:0005515
Bva04g00099 945 Pfam Leucine rich repeat 95 156 IPR001611 GO:0005515
Bva04g00099 945 Pfam Protein tyrosine and serine/threonine kinase 713 941 IPR001245 GO:0004672|GO:0006468
Bva04g00099 945 SUPERFAMILY Protein kinase-like (PK-like) 683 941 IPR011009 -
Bva04g00099 945 Gene3D Ribonuclease Inhibitor 23 184 IPR032675 -
Bva04g00099 945 Gene3D Ribonuclease Inhibitor 185 286 IPR032675 -
Bva04g00099 945 ProSiteProfiles Protein kinase domain profile. 672 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00099 945 SMART LRR_typ_2 404 428 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 356 380 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 93 116 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 452 476 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 546 568 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 522 545 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 167 191 IPR003591 -
Bva04g00099 945 SMART LRR_typ_2 285 309 IPR003591 -
Bva04g00099 945 Gene3D Phosphorylase Kinase; domain 1 657 751 - -
Bva04g00099 945 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 11 942 - -
Bva04g00099 945 Pfam Leucine Rich Repeat 288 306 IPR001611 GO:0005515
Bva04g00099 945 SUPERFAMILY RNI-like 247 561 - -
Bva04g00099 945 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Bva04g00099 945 ProSiteProfiles Leucine-rich repeat profile. 524 546 IPR001611 GO:0005515
Bva04g00099 945 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Bva04g00099 945 PANTHER F12K21.25 11 942 - -
Bva04g00099 945 SUPERFAMILY L domain-like 16 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00099 Bva-Chr4 627380 631159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00099 146 945 Receptor kinase-like Gene Family AT2G41820 37.500 2.43e-153 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g00099 PK_Tyr_Ser-Thr 4.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00099 - - gmx:100796647 1110.52