Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00096 atgaGTTCCATAGAGAACAACAACAACCACCACCAGGTGAAAGCACCCACCAAAGAAGAAGACGATGCTTGCATCTATGCCATGCTCTTGTCCAGTTTCAATGTGTTCCCTTCAATTGTCAATGCTGCGATTGAACTCAACCTGTTTGATATTATTTCCCAATCAACCCTATCTGGTGCTTATGTCTCACCCTCTGAGATCGCTTCGCACCTTCCCGCACACCACACTCAATTAATTGACAGGCTAGACAGGATGCTGCGTGTGCTTGCTTCTTTCTCTGTTCTTGATTCCACCACACGCACAAACAAAGATGGCCATGTTGAGAGGCTCTATAGGCTCTCACTGGCCGGAAAATACTTTGTGCAGAACCAAGTTGAGAGTCTCGCTTCATTCTCAAACCTCACCTGCCATCCAGCTTCTGTACAGGTTTGGTTAAACCTAAAGGAAGCAGTTCTTGATGATGGAATAGACCTATTCAGCACAGTTCATGGGATACCTATATGGAAATACATGGGGAAGGATCCAAAACTGGGGAAAACATTTAACAGTGCAATGGCTGGCATAGCAGCGATACAGATGAGGAAGTATTTGGAAGTATATGATGGATTTGAAGGTGTATCAACGTTGGTTGATGTTGGAGGTGGCACTGGCCAAAGCCTGCAAATGATTCTCTCCAAGCATCCTTCCATAAAGAAGGCTATTAACTTTGATTTACCACAAGTCATTCAGAATGCCCCACCCCATCCAGGTATTGAGCATGTTGGAGGAGATATGTATGCAAGTGTTCCACAGGGCGATGCAATAATGGTTAAGGCGACGTGCCACAATTGGACAGATGACAAATGTGTCGCACTACTGAAGAACTGCTATAAATCACTTgctgaaaatggaaaagtgaTTATTTTGGACATGATCATGCCTGAAGAACCCGAGACATCTGTTGCTTCTCAATATGTCTCCATCATTGACAACACCATGTTCATTCAAGCTGGTGGCAAGGAAAGAACTGAGAGAGAATTTGCCAAGTTGTGCAAAGACTCTGGTTTCTCAAGCTATCGAGTTGTTTCTCGTGCTCTTTCTGTTTATGGAGTCatagaattttataagta 1109 0.4274 MSSIENNNNHHQVKAPTKEEDDACIYAMLLSSFNVFPSIVNAAIELNLFDIISQSTLSGAYVSPSEIASHLPAHHTQLIDRLDRMLRVLASFSVLDSTTRTNKDGHVERLYRLSLAGKYFVQNQVESLASFSNLTCHPASVQVWLNLKEAVLDDGIDLFSTVHGIPIWKYMGKDPKLGKTFNSAMAGIAAIQMRKYLEVYDGFEGVSTLVDVGGGTGQSLQMILSKHPSIKKAINFDLPQVIQNAPPHPGIEHVGGDMYASVPQGDAIMVKATCHNWTDDKCVALLKNCYKSLAENGKVIILDMIMPEEPETSVASQYVSIIDNTMFIQAGGKERTEREFAKLCKDSGFSSYRVVSRALSVYGVIEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00096 369 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Bva04g00096 369 PANTHER O-METHYLTRANSFERASE 8 369 IPR016461 GO:0008168
Bva04g00096 369 PIRSF O-mtase 4 369 IPR016461 GO:0008168
Bva04g00096 369 CDD AdoMet_MTases 208 301 - -
Bva04g00096 369 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Bva04g00096 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 367 IPR029063 -
Bva04g00096 369 Gene3D Vaccinia Virus protein VP39 121 369 IPR029063 -
Bva04g00096 369 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Bva04g00096 369 Gene3D - 3 120 IPR036388 -
Bva04g00096 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Bva04g00096 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 8 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00096 Bva-Chr4 612753 616437 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00096 20 369 Monolignol Biosynthesis Gene Families AT5G54160 46.023 4.11e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00096 - - ag:AAB48059 430.639