Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00093 ATGGATATGCTCTCTGGAAGCAGCAACAGAATCGGaagccaaaaagaaagtaaCCAAAAGGTAGCCAAAGAAGTAAACATGGCTTCCTATTCCACTGTGAATGATCAAGTTATGAAGCTGCAAAACACTACTCAAAATGCAGCAGAGGATATGGCTCCATCTCTGCTTTGGTCAAGTCCATACACTGCCATGTCAGTGTCCGAAATCGCTTCTCGCTTTCCAAATGCTCACTCAGAGTTTCCTCAAAAGCTTCAGCGCATACTGCGTCTACTTTGCAGTCATTCTCTTCTGACTTGCTCTTCACGTACAAATGAAGATGGTAGCACTGAAAGAGTTTATGGAATCTCAGCTGTTGGTAAGTACTTCGTGCCAGATGAAGATGGAGACAACTTTGCTTCTTTCTCAGCATTTTCCTATTGTCATGCGGTTAAGGAGATCTGtacttgtaattttatttctgcCAAATTAACTCGTGAAGGAATAGAGCACGTTGGAGGAGATATGTTTGCAAGTGTTCCAAATGGTGATGCCATAATACTCAAGGCTGTGTGCCATAATTGGTCAGATGAGAaatgtgtagaagttttaaGAAATTGTCACAAAGCACTGCCGCAAGATGGAAAGGTGATTGTTGTGGAATTCATATTGCAAGAAACACCAGAGACAACCGGTGCATATAAATGTGTTAGCATTTTGGACAGTATCATGTTTATTACTGTTGGCGGAAAGGAAAGGACTCAGAAAGAATTTGAGAGTTTGTGCAAAACCTCTGGATTATCCAAATTTCAAGTGGCCGGTCTTGCTATGAATGCATTGGCAGTGATggaattttacaaata 839 0.3886 MDMLSGSSNRIGSQKESNQKVAKEVNMASYSTVNDQVMKLQNTTQNAAEDMAPSLLWSSPYTAMSVSEIASRFPNAHSEFPQKLQRILRLLCSHSLLTCSSRTNEDGSTERVYGISAVGKYFVPDEDGDNFASFSAFSYCHAVKEICTCNFISAKLTREGIEHVGGDMFASVPNGDAIILKAVCHNWSDEKCVEVLRNCHKALPQDGKVIVVEFILQETPETTGAYKCVSILDSIMFITVGGKERTQKEFESLCKTSGLSKFQVAGLAMNALAVMEFYK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00093 279 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 157 279 - -
Bva04g00093 279 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 63 141 - -
Bva04g00093 279 PANTHER O-METHYLTRANSFERASE 157 279 IPR016461 GO:0008168
Bva04g00093 279 PANTHER O-METHYLTRANSFERASE 63 141 IPR016461 GO:0008168
Bva04g00093 279 Pfam O-methyltransferase domain 157 259 IPR001077 GO:0008171
Bva04g00093 279 Gene3D Vaccinia Virus protein VP39 157 265 IPR029063 -
Bva04g00093 279 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 279 IPR016461 GO:0008168
Bva04g00093 279 MobiDBLite consensus disorder prediction 1 22 - -
Bva04g00093 279 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 155 276 IPR029063 -
Bva04g00093 279 Gene3D - 53 150 IPR036388 -
Bva04g00093 279 CDD AdoMet_MTases 154 216 - -
Bva04g00093 279 SUPERFAMILY "Winged helix" DNA-binding domain 56 127 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00093 Bva-Chr4 581586 583935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00093 157 264 Monolignol Biosynthesis Gene Families AT5G54160 56.881 2.08e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00093 - - gmx:100802593 183.341