Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00086 ATGACAGCAACCCATTTTTCTgagaGATCATCAATGGAGATGGAATCATGTGTTCCACCAGGGTTTAGATTTCATCCAACAGAAGAAGAACTTGTGGGATATTACCTCAAGAAGAAGATCAACGCACTTAGAATCGATTTAGATGTTATCGTTGAGATCGATCTCTACAAAATCGAACCATGGGATATACAAGATAGATGCAAGCTAGGGTATGAGGAGAAGAATGAATGGTACTTTTTCAGCCACAAAGATAAGAAGTACCCTACCGGAACCCGAACTAACAGAGCCACCGCAGCCGGATTCTGGAAAGCAACAGGGAGAGACAAGGCTGTGATgtcaaaaaatagaattatagGGATGAGGAAGACACTGGTTTTCTACCAAGGACGTGCTCCTAATGGCAGGAAAACAGATTGGATAATGCATGAATATCGCCTCCAAACATCTGAACATACTCCTCCTCAGGCAAAAGGATGGGTGGTATGCCGAGCATTCAGAAAGCCAAGTCCAAGTCAGAGACCAGGGTTTGAAGCATGGAACAGTAGTCAAGCGCAGTATCTGAGAGAGCAGAGCTTTGCAAGAATACCCTTATCATTTGCagatattataaatgaaacatcaaataatttgCTTCATCGTCCAACCGCCGAAGGAACAAGTTTTAGTCAATCCTTTGGCTCTGATgatcagcagcagcagcaacttGTTTCTAACCAGCAGCTTCTTGTTGAGCTTCCACAGCTGGATAGCCCCACAGCAAGTTTGGCAGTAAAAGAAGATAACTACAATGAAGGGAGGAGAAGTAACATTAATGGACAATGTATTGATTGGAAAAACTTTGATAACTTGTTTGCTTCGCAATTGACAGATACACCTTACAATAGTCATGGCCTGCAACTTGAGAATCAAGCTAGTCATCACATGTCTCATATTATAGGATGCTTTCCAGCTGACTCATA 959 0.3973 MTATHFSERSSMEMESCVPPGFRFHPTEEELVGYYLKKKINALRIDLDVIVEIDLYKIEPWDIQDRCKLGYEEKNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYQGRAPNGRKTDWIMHEYRLQTSEHTPPQAKGWVVCRAFRKPSPSQRPGFEAWNSSQAQYLREQSFARIPLSFADIINETSNNLLHRPTAEGTSFSQSFGSDDQQQQQLVSNQQLLVELPQLDSPTASLAVKEDNYNEGRRSNINGQCIDWKNFDNLFASQLTDTPYNSHGLQLENQASHHMSHIIGCFPADS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00086 319 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Bva04g00086 319 SUPERFAMILY NAC domain 6 167 IPR036093 GO:0003677|GO:0006355
Bva04g00086 319 Pfam No apical meristem (NAM) protein 19 146 IPR003441 GO:0003677|GO:0006355
Bva04g00086 319 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Bva04g00086 319 MobiDBLite consensus disorder prediction 213 233 - -
Bva04g00086 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 294 - -
Bva04g00086 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00086 Bva-Chr4 535360 539126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00086 14 316 NAC Transcription Factor Family AT1G71930 52.819 8.85e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g00086 NAM 5.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00086 - - var:108325420 426.402