Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00083 ATGGAGAAGGAAAGCAAGGAACCAAAAGCTTCAACGAGATGCGTTTTGCCGTATCAAACTCCACGTCTCAGAGACCACTACCTTCTTGGCACGAAGCTTGGGCAAGGCCACTGGGGCACCACATACCTCTGCACCCACAAACCCTCAGGGAAGCTCTATGCCTGCAAATCGATCCCAAAACGAAAGCTTTTGTGCAAAGAAGATTACGATGATGTGTGGAGAGAGATTCAGATCATGCATCATTTGTCTGAGCACCCAAATGTGGTTCGGATACAGGGAACCTTTGAGGATTCTGTGTTTGTTCACCTAGTTATGGAGCTCTGTGCTGGGGGTGAGCTTTTTGATAGGATCCTTCAAAAGGGACATTACAGTGAGAGAGAGGCTGTCAAGTTGATAAAGACTATTGTCGGGGTGGTGGAAGCTTGTCACTCTCTTGGGGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATATTAGCTCTGGTGACGATGCCAAAATGAAGGCTATAGATTTTGGATTGTCCGCCTTCTACAAGCCAGGACAATGTTTTCGTGATGTAGTTGGAAGTGCCTACTATATTGCCCCTGAGGTGTTGTGCAAGCATTATGGACCAGAAGTGGATGTATGGAGTGCGGGTGTTATCCTTTACATCTTATTGTGTGGGGTGCCACCTTTTTGGGCCGAAACTGAAACAGGAATTTTCAAACAGATTTTACATGGAAAGTTAGATTTTGAATCTGAACCATGGCCAAGCATCTCAGAAAGTGCCAAAAATTTGATAACCAGGATGCTTGAAAGGGACCCAACGAAAAGAATTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTTGATGAAGAAAATGCTCCTGACAAACCTCTGGATTCTGCAGTTTTGACACGCCTGAAGCATTTCTCTGCGATGAATAAACTTAAGAAGATGGCACTACAAGTTATAGCAGAAAGACTTTCAGAGGAAGAAATTGGTGGGCTGAAAGAGTTGTTCAAAATGATTGATACAGACAACAGTGGGACAATAACATTTGAAGAGCTCAAAGAAGGTCTGAAAAAAGTGGGTTCTGATCTAATGGAATCTGAAATTAGATCCCTATTGGAAGCGGCTGATATAGACAATAATGGGACAATAGAGTATGGTGAATTTCTTGCGGCTACACTGCACCTAAATAAGATTGAAAGGGAGGAGAATTTAGTTGCAGCTTTTGCCTATTTTGACAAAGATGGTAGTGGTTACATCACAATTGATGAGCTTCAACAGGCATGCAAAGACTTTGGCCTTGTTGATGTCCATCTAGATGAAATACTCAAAGAGATTGATCAAGACAATGATGGGAAAATTGATTATGGGGAATTTGTTGCAATGATGAAGAAGTGTGAGGGAGACGTTGGTAGGAGTAGAGCCATGAAAGGCAATTTGAACTTGAATATAGCTGATGCCTTTTGCAGTAAATG 1478 0.4256 MEKESKEPKASTRCVLPYQTPRLRDHYLLGTKLGQGHWGTTYLCTHKPSGKLYACKSIPKRKLLCKEDYDDVWREIQIMHHLSEHPNVVRIQGTFEDSVFVHLVMELCAGGELFDRILQKGHYSEREAVKLIKTIVGVVEACHSLGVMHRDLKPENFLFDISSGDDAKMKAIDFGLSAFYKPGQCFRDVVGSAYYIAPEVLCKHYGPEVDVWSAGVILYILLCGVPPFWAETETGIFKQILHGKLDFESEPWPSISESAKNLITRMLERDPTKRISAHEVLCHPWIVDEENAPDKPLDSAVLTRLKHFSAMNKLKKMALQVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLKKVGSDLMESEIRSLLEAADIDNNGTIEYGEFLAATLHLNKIEREENLVAAFAYFDKDGSGYITIDELQQACKDFGLVDVHLDEILKEIDQDNDGKIDYGEFVAMMKKCEGDVGRSRAMKGNLNLNIADAFCSK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00083 492 ProSitePatterns EF-hand calcium-binding domain. 342 354 IPR018247 -
Bva04g00083 492 Pfam Protein kinase domain 30 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00083 492 CDD STKc_CAMK 26 285 - -
Bva04g00083 492 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Bva04g00083 492 ProSiteProfiles EF-hand calcium-binding domain profile. 439 470 IPR002048 GO:0005509
Bva04g00083 492 CDD EFh 406 465 IPR002048 GO:0005509
Bva04g00083 492 Gene3D - 295 471 - -
Bva04g00083 492 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Bva04g00083 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 9 476 - -
Bva04g00083 492 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00083 492 SMART serkin_6 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00083 492 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Bva04g00083 492 Pfam EF-hand domain pair 404 465 IPR002048 GO:0005509
Bva04g00083 492 Pfam EF-hand domain pair 334 394 IPR002048 GO:0005509
Bva04g00083 492 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Bva04g00083 492 SUPERFAMILY Protein kinase-like (PK-like) 23 295 IPR011009 -
Bva04g00083 492 CDD EFh 334 393 IPR002048 GO:0005509
Bva04g00083 492 SMART efh_1 439 467 IPR002048 GO:0005509
Bva04g00083 492 SMART efh_1 333 361 IPR002048 GO:0005509
Bva04g00083 492 SMART efh_1 369 397 IPR002048 GO:0005509
Bva04g00083 492 SMART efh_1 405 433 IPR002048 GO:0005509
Bva04g00083 492 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Bva04g00083 492 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Bva04g00083 492 PANTHER BNAA09G05220D PROTEIN 9 476 - -
Bva04g00083 492 Gene3D Phosphorylase Kinase; domain 1 29 112 - -
Bva04g00083 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Bva04g00083 492 SUPERFAMILY EF-hand 325 467 IPR011992 -
Bva04g00083 492 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Bva04g00083 492 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00083 Bva-Chr4 523155 526487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00083 8 489 EF-hand Containing Proteins AT1G35670 80.290 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g00083 Pkinase 9.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00083 K13412 - gmx:547887 843.958