Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00080 ATGCCAGCAACAGCAGCGTTTGGTGGTGTAGAAACTGTCAATGGAGATTCACTCGATACTCCAGCTTCCTCCAAACACGGCCCTCGAGAATCGCGTGATCTCCCTCCTTTAATCTCCTCCTCTTACCCAATCACTCTCAGGTTCGTGGACGTGAGCTATCGATTAAAGATAGAGAATAAGCTGGGAGGGAGCAGCATTAAGCGTATGCTGACTCATGGATCCTCATCGCCGTCTGATGAAAGATCAAGGGTGCCTATAGTACAGGAGCGGGCCATCTTAAACGGTATTACGGGTATGGCGTCCCCGGGAGAAATCCTAGCCATCCTGGGCCCATCGGGGAGCGGAAAATCAACGTTATTAAATGCGATTGCAGGGAGACTCCATGGACACGGCCTCACTGGAACAATTCACGCCAGCGGCGCGAAACTCAGCAAAAGCGTTCTTCGACGAACCGGATTCGTGACTCAGGATGATGTTCTGTACCCTCACCTCACAGTGCGTGAAACGTTGATCTTCTGCTCCCTCCTTCGCCTCCCCAGAAGCCTTTCGAGGAAAGAGAAGATCGCGGTGGCTGAGTCGGTGATCGCTGAGTTGGGGCTCGTGAAATGCGAGAACACCATAATCGGGAATAGCTTCATTCGCGGTGTTTCGGGTGGGGAAAGGAAACGGGTGAGCATAGCCCACGAGATGCTCATAAACCCAAGCTTGTTGATTCTGGATGAACCCACCTCGGGTTTGGACTCCACGGCGGCGCACCGCCTCATGACCACTCTTGGGTCGCTGGCGCAGAAGGGGAAGACGGTGGTGACGTCGATGCACCAACCTTCGAGTCATATCTACCAGCTGTTTGATGCGGTGCTCGTGTTGTCAGAAGGGCAGTGTTTGTATTTTGGTAAAGGTAGTGAAGCTATGATCTACTTCGAGTCTGTTGGCTTCACGCCGTCTTTTCCTATGAACCCTGCGGATTTCCTGCTTGATCTTGCCAACGGTGTTTGCCCAGTTGAAGGTCTAAGTGAAAGAGATAGGCCAAACATAAAGCAAAACTTAGTTCATTCATACAACACCGTACTGGCTCCGAAAGTAAAAGCTACTTGCGTGGACACTACCCGTGTTTCTAGAAAAGAGAATTTCTTGGGAAACAACTCTTCCAAAGAACCTAGATTTAATGACAGGGTTACCTTCCCTAATTGGTTCAATCAATTCAGCATTCTGCTAAAACGAAGCCTCAAAGAACGAAAGCATGAATCCTTCAACACTCTTAGAGTCTTCCAAGTTATTGCTGCTGCCCTATTAGCTGGTTTAATGTGGTGGCACTCTGACTATAGGAACATTCAAGATCGCCTTGGCCTCCTCTTCTTCATTGCAATCTTTTGGGGAGTCTTCCCATCTTTTAACTCGGTCTTTGCATTCCCCCAAGAACGTGCAATCTTCATGAAAGAGCGAGCTTCTGGTATGTACACATTGTCTTCCTATTTTATGGCTCGAATTGTTGGAGACCTGCCCATGGAGCTGATTCTTCCCACAGTTTTCCTCCTTGTGACTTATTGGATGGGGGGATTGAAGCCTGATTTATGGGCATTCCTCTTGACTCTGTTGGTTGTTCTCGGATACGTGCTTGTGTCTCAGGGTCTTGGCCTTGCTTTAGGTGCAGCAATAATGGATGCGAAGCAGGCTTCTACCGTAGCAGCAGTGACAATGCTGGCATTTGTCTTAACCGGTGGATACTATGTGCATAAGGTGCCATCTTGCATGGCGTGGATCAAATACATATCCACAACCTTTTACTGCTATAGATTGCTGATCGATGTGCAGTATGGGGATGGCAAGAAAATCTCACACCAATTGGGTTGCTCTGCCTCTCAAGGTGGCAGGGACAGTGCCACCTGCAAGTTTATTGAGGAAGATATGGTGGGACAAATCAACCCTATAGGAAGCATTGGTGTATTGCTTCTCATGTTTGTGGGATACAGATTACTGGCATACCTTGCCTTGAGGCGCATCAAGGGCTG 2009 0.4878 MPATAAFGGVETVNGDSLDTPASSKHGPRESRDLPPLISSSYPITLRFVDVSYRLKIENKLGGSSIKRMLTHGSSSPSDERSRVPIVQERAILNGITGMASPGEILAILGPSGSGKSTLLNAIAGRLHGHGLTGTIHASGAKLSKSVLRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRSLSRKEKIAVAESVIAELGLVKCENTIIGNSFIRGVSGGERKRVSIAHEMLINPSLLILDEPTSGLDSTAAHRLMTTLGSLAQKGKTVVTSMHQPSSHIYQLFDAVLVLSEGQCLYFGKGSEAMIYFESVGFTPSFPMNPADFLLDLANGVCPVEGLSERDRPNIKQNLVHSYNTVLAPKVKATCVDTTRVSRKENFLGNNSSKEPRFNDRVTFPNWFNQFSILLKRSLKERKHESFNTLRVFQVIAAALLAGLMWWHSDYRNIQDRLGLLFFIAIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDLPMELILPTVFLLVTYWMGGLKPDLWAFLLTLLVVLGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCMAWIKYISTTFYCYRLLIDVQYGDGKKISHQLGCSASQGGRDSATCKFIEEDMVGQINPIGSIGVLLLMFVGYRLLAYLALRRIKG 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00080 669 Pfam ABC transporter 94 244 IPR003439 GO:0005524
Bva04g00080 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 22 667 - -
Bva04g00080 669 Gene3D - 83 309 IPR027417 -
Bva04g00080 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 304 IPR027417 -
Bva04g00080 669 MobiDBLite consensus disorder prediction 1 36 - -
Bva04g00080 669 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 316 IPR003439 GO:0005524
Bva04g00080 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 22 667 - -
Bva04g00080 669 CDD ABCG_EPDR 90 298 - -
Bva04g00080 669 Pfam ABC-2 type transporter 273 339 IPR043926 GO:0140359
Bva04g00080 669 SMART AAA_5 102 301 IPR003593 -
Bva04g00080 669 Pfam ABC-2 type transporter 400 604 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00080 Bva-Chr4 491628 498073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00080 92 306 Calmodulin-binding Proteins AT2G36910 25.333 3.86e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00080 K05681 - gmx:100812127 1028.47