Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00067 ATGGAATACAAAGTGAAAACCCCAACATCTCCTCCAAATATCCCAATCCCTCTTCCCACTTTGCTCTCCAATTCtccctcttcctcttcttcaccGCATTCTCAATCTCCTCCACCGCTTACTTCTCCCACTGCTCCACCGCCGCCGCCGCATTCTCCTCCTCCACCTGTGGTGATTAGCCCTTGTGCTGCCTGCAAGATCCTCCGCCGCCGATGCGTCGAGAAGTGTGTCTTAGCACCCTATTTCCCTCCCACTGATCCACTCAAGTTCACCATTGCCCACAGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCTCAGAGAGCAGATGCTGTGAGCAGCATGGTGTATGAAGCAAATGCCAGGATCAGAGACCCAGTTTATGGTTGCGCAGGAGCAATTTGCCATCTTCAAAAGCAAGTTAATGAGCTACAAGCACAATTGGCAAAGGCACAAGCTGAACTTGTCAATATGCAATGCCAGCAGACCAATTTAATTGCACTAATCTGCATGGAAATGAGCCAATCTCAGAACCAGCACATGCTTCAGCCTCAACCACACGTTGATATGAGCTGCTTCTTAGATGAAAACGGCTTGGGATCAGCCTGGGAACCTCTCTGGACATG 644 0.4814 MEYKVKTPTSPPNIPIPLPTLLSNSPSSSSSPHSQSPPPLTSPTAPPPPPHSPPPPVVISPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICHLQKQVNELQAQLAKAQAELVNMQCQQTNLIALICMEMSQSQNQHMLQPQPHVDMSCFLDENGLGSAWEPLWT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00067 214 MobiDBLite consensus disorder prediction 32 53 - -
Bva04g00067 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 48 198 - -
Bva04g00067 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 48 198 - -
Bva04g00067 214 MobiDBLite consensus disorder prediction 1 53 - -
Bva04g00067 214 Pfam Lateral organ boundaries (LOB) domain 61 158 IPR004883 -
Bva04g00067 214 Coils Coil 140 167 - -
Bva04g00067 214 ProSiteProfiles LOB domain profile. 60 161 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00067 Bva-Chr4 413555 414903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00067 57 214 AS2 family AT1G07900 70.370 5.71e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g00067 LOB 2.4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00067 - - gmx:100806667 304.293