Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00063 ATGGGGAGGAAAGGGAGTTGGTTTTCGGCAGTGAAGAAAGTTATCAGTCCTGAAAACAAGAACGATCagAAAAACCAGACATCGAAGAAACAATGGTTTGCCAAGAACAAGAATTCCGATCAAGTTTTGTCATACCAAAAAGCACCAATTCCTGTTGCTCCCCCTCTTCCAGatttcaacttaaccaaggcAGATGATGAACAAAGCAAGCATGCTTATTCTTTGGCTCTTGCCACTGCAGCCGCCGCAGAGGctgcttcaaaggaagaaatagcAGCCGTCAAGATTCAGACAATATTCCGAGGATATCTGGCAAGAAGGGCGTTGCGTGCCTTGAGAGGTTTGGTAAGGTTGAAAACATTGATACAAGGGCAATCGGTTAGACGGCAAGCAGCTACTACCTTAAGATACATGCAAACTCTTTCAAGATTGCAGTCCCAGATTCGTGCAAGGAGGATCAGAATGTCTGAGCAGAACCAGGCTCTCCAGCGGCAACTGCAGCAGAGACGTGAAACAGAacttgagaaaatgaaagccTCTCAGGTTGGAGAAAGATGGGATGATACCTTGCAATCAAAGGATCAAATTAAAGCAAGACAAGCAATCAGGCAAGAAGCTGCTataagaagagagagagcttTGGCCTATGCACACACGCATCAGCAAACATGGAGAAACTCTCCAAAACCTGTGAATCCCTCGTTTATGGATCCAAACAATCCCCACTGGGGTTGGAGTTGGCTAGAGCGATGGATGGCAGCTAGGCCATGGGAGGGGACTCAAAATGAGCATGCATCTGTAAAGAGTGCAGCAAGCAGTAAAATGTCTGTTGGGGACATCACCAAATTGTATTCTCTTCGTGATACTAACCATGATAACAAGCCTTCCCCTTCCCCGGCCGGCCAAAAATCAAGCCAGCGCCGGTCCCCTTCAACCCCAGCAGCTTCAAGGGCCCCATCTTTGTCATCTGCTCCTGGAAAAGCAAGGTCACTAAGCTCAAAGGGGAATATCCGGGGTGCTGCTGCTGATGATTCAAGGAGCTTGTACAGCGTTCAATCAGAACGCAACAGGAGGCATAGCATTGCAGGGTCATCAATGAGAGATGATGAGAGTCTTGCAAGCTCACATGCCTTCCCAATTTACAGTACTGCACCTACAACAAAGGCAACAAATGTGAGGTCCAAAACGCAAACTCCATCTTCAAGTTTAGATAAAAATCTGACACGAGATAAAGCTTCGGTTGTTTCTGCTGCTAAGAGACGCCTTTCCTTCCCAGCTTCTCCTGCTGGTGCAAGGAGCAATTCTGTTCCTGCTAAGAATGCTTCTAAGCTCACTCAACAGAAAGTTACCAATGGAGGGAACAGGTA 1367 0.4455 MGRKGSWFSAVKKVISPENKNDQKNQTSKKQWFAKNKNSDQVLSYQKAPIPVAPPLPDFNLTKADDEQSKHAYSLALATAAAAEAASKEEIAAVKIQTIFRGYLARRALRALRGLVRLKTLIQGQSVRRQAATTLRYMQTLSRLQSQIRARRIRMSEQNQALQRQLQQRRETELEKMKASQVGERWDDTLQSKDQIKARQAIRQEAAIRRERALAYAHTHQQTWRNSPKPVNPSFMDPNNPHWGWSWLERWMAARPWEGTQNEHASVKSAASSKMSVGDITKLYSLRDTNHDNKPSPSPAGQKSSQRRSPSTPAASRAPSLSSAPGKARSLSSKGNIRGAAADDSRSLYSVQSERNRRHSIAGSSMRDDESLASSHAFPIYSTAPTTKATNVRSKTQTPSSSLDKNLTRDKASVVSAAKRRLSFPASPAGARSNSVPAKNASKLTQQKVTNGGNR 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00063 455 PANTHER IQ-DOMAIN 5-RELATED 87 441 - -
Bva04g00063 455 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 86 - -
Bva04g00063 455 MobiDBLite consensus disorder prediction 428 455 - -
Bva04g00063 455 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Bva04g00063 455 SMART iq_5 88 110 IPR000048 GO:0005515
Bva04g00063 455 MobiDBLite consensus disorder prediction 1 33 - -
Bva04g00063 455 Coils Coil 152 175 - -
Bva04g00063 455 MobiDBLite consensus disorder prediction 384 409 - -
Bva04g00063 455 Pfam IQ calmodulin-binding motif 92 110 IPR000048 GO:0005515
Bva04g00063 455 MobiDBLite consensus disorder prediction 286 370 - -
Bva04g00063 455 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 87 441 - -
Bva04g00063 455 MobiDBLite consensus disorder prediction 290 330 - -
Bva04g00063 455 MobiDBLite consensus disorder prediction 384 455 - -
Bva04g00063 455 PANTHER IQ-DOMAIN 5-RELATED 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00063 Bva-Chr4 389883 393147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00063 1 429 IQD Protein Family AT5G03040 43.737 9.04e-103 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00063 - - vvi:100256490 434.106