Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00053 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGAGTCCTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCTTTAGGTTCTGTGGCGAGATGGAGAGACTCGTCTCATCACGGGTCCCGAGAATTCAATCGGTGGGGATCGGCCGATTTCCGCAGACCACCAGGTCATGGTAAGCAGGGTGGTTGGCACCTGTTTTCCGAAGAATCTGGTCATGGGTATGCTCTTTCTCGGTCTGGTGACAAGATGCTTGAAGAAGAGAACTGTAGGCCGTCCATTTCAGTTTCACGAGGGGATGGAAAGTATAGCAGGAACAGTAGAGAAAGTAGAGGATCGTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAAACTACTAACgtctctttaaatttatccaGGAGGCCACCAGATATGATTACTGATCATAGGGTACTTGATGACATGCTAACATATCCATCTCATCCTCATTCTGACTTTGTAAACACTTGGGATGAGCATCACTTGAAAGAGCAGCATGATAAAATGGGTGGTGTCAATGGGATGGGCACAAACCAGAGATGTGACAGAGAAAATTCGGTGGGTTCACTTGATTGGAAGCCTCTTAAATGGACCCGTTCTGGGAGTTTGTCTTCTCGAGGCTCAGGTTTTAGCCATTCTAGTAGCTGTAGGAGCATGGGAGGGACAGATTCCTATGAAGCAAAGGCTGATTTGCTGCCAAAAAATGCAACTGCAATGGAGTCACATTCAGGAGACGCTGCTGCATGCACCACATCTGCTGCACCATCTGAAGAAACAACTTCTAGGAAGAAACCTCGACTGGGGTGGGGTCAGGGACTTGCACagtatgagaaaaagaaagttgaggGACCTGATAGAAGTGCAAACAAGGATGGCCCTGTTTTGTCTTCTAGTAATTTGGAAGCCTGTAATTTCCTTGGTCCTGGGTTGGTTGATAAGAGCCCCAAAATTACAGGATTTTCAGATTGTGCATCTCCTGCAACTCCATCTTCTGTTGCGTGCAGTTCCTCGCCAGGGGTGgatgataaattatttggaAAGGCTCCAAATGTAGATAATGACATTAGTAATTTGTGTAGTTCACCTGGTCCTGGGTTTCAAAATTTAGAGAAGTTGGATGTCAACTCCTTGGGTAATTTGGCTTCTTCAATTTATGAGTTACTACAATATGATGATCGAAGTTCAATGAACAAGTTGCTGATATGGAAAGCTGATGTTTCAAAAGTCCTCGAAGTTACTGAAACTGAAATTGATTCGCTTGAAAATGAACTGAAGTCACTAAATTCAGGTTCTGGAGGTAGCTGTCCATGTCCATCAGCATTGGGCTCCTTGAGGGAAGGGAACTCTGCAAAATCTTGTGAAGAACATGCTGGAGGTTCTGACAAGATATATTGGCCAGAGCCATTGCATGTTGTTTCTTCAGCGGACCCTGGTGTGGACAAAATGCctctttcaaataatttgtgCAGTAGTCATGCAAATCTGATGGAAGAGGATATTGACAGTCCTGGAACAGCAACCTCTAAATTTATTGAACCTCTGCCTTTGGTTAATATAGTTTCTTCAGGTGATATGGTGCAGCATGATAATTGTTCTGGAGACTTGGATCGTATCCACTCTACAAGCATGAAATGTTTGATGGCTTGTACTAATAAGGTAGAAGCTAGTCTATCTGCATTTGGCGATGGTTGTATGTCCAAGGGGATTAAAGATGGCGTGGGAGCTACTTCAGGGGCAGCTGAGAATGTTCTATGTAATACCATTATTCATTCCAATAAAGAATCTGCAAACAGAGCATGCCAAGTATTTGACAAATTATTGCCAAAAGATTGTTGTATGACTGGTAATATGGGAGCTGTGAGTGACTTAAACAATATTAGTGGCACATTGATTAAAAGAAGACTTGCTGAGAGGAAGCAGTTTGCAAATTTTAAGGAAAGAGTCATAGCCATTAAGTTTAGAGCCCTTCATCACCTTTGGAAAGAAGATATGCGCTTACTTTCTGTAAGGAAATGTCGTCCAAAATCCCATAAGAAACTTGAAGTAAGCTTGCGGACTACTAATAATGGTTATCAGAAGCATCGATCTTCCATTCGGTCTCGGTTTGCCTATCCTGCAGGAAATCTAAGCCTGGTTCCTACGTCtgagataattaatttcactGGCAAACTGCTTTCAGACTCCCAAATTAAAGTTCACAGAAACAACTTGAAGATGCCGGCTTTAATATTGGATGAGAGGGAGAAGGTGACATCAAGGTTTGTATCTAGTAATGGATTGGTTGAAGATCCATTGGCTTTGGAGAAAGAAAGGGCTATGATCAACCCTTGGACATcagaagagaaggaaatatTTATGGAGAAATCAGCTGCTTTTGGAAAGGATTTCAAGAAAATTGCTTCTTTCCTTGACCACAAGACTACTGCTGACTGTGTTGAATTCTActacaaaaatcataaatctgattgttttgagaaaattaggAAGAAGCATGGTGTTAGTAAGTTAGGTAAGTTATTTTCAGCTAATACCGACTTGGTGACCACAGGAAAGAAATGGAATTGTGAAATCAATGCTGCTTCACTTGAAATTTTGAGTGCAGCTTCACTGATGGCGTGCCATGCTGATCGCATTACCAGTAACCAAAAAATATGTTCATCAAGTTCCCTTTTTGGGGGATATGGAATTATGAAAACATCAAGGGGTGAGGATGGTGTCCTGGAGAGATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGTTGCAGCTGATGTGTTGGCTGGTATATGCAACTCTCTTTCATCTGAGGCTATGAGCTCCTGCATAACAAGCTCTATTGATCCTGCTGATGGTAACAAGGATAGGAAGTACCTTAAAGTGAATCCTGTGAGCAAACAGCCCTTGACTTCTGCTGTTACTCAAAATGTTGATGATGAAACTAGTTCAGATGAGAGCTGTGGGGAGATGGATCCTGTTGATTGGACAGATGAGGAGAAGTCTGCTTTTCTTCAGGCTGTGTCATCTTTCGGTAAGGATTTTGCAATGATCTCACAATGTGTGGGAACGAGGTCCCAAGATCAGTGCAAGGTTTTCTTCAGCAAGGCTCGGAAATGCCTTGGGTTGGATCTCATGCGCCCCAGGCCTGGAAATGACATATcacaagaaaatgataatgcAAAAAGTAGTGGGAGTGATACAGATGATGCCGGTGTTGTAGAGACAGGTTCAGTTGTTGGCACCGATAAGTCGAGCACTAAAACAGATGAGGACATGCCCTTGCCTGCGAAGGAGACATGCCACAAAGAATCTAATCCTGTTGAAGCCAGGAATTCGTCAACTGACTTGAACAATGCAAAGAACACTAACGGGACAGAAGTGGATCACAAAGATGCTGCAAATGTAGATAATATGGTGTCTGATGCATCCAAACTCCTCTGTGGTGGTGATGCGGATATTTTATGCAGTTCTGGTAACTCTGGTTCAGATAATGCCCATAGAGCTTTAATTATGTCAGCTAACAAAGAGGTTGAAAAAGATGATTTTAATAAACTGGGAGATGTGGTTCTAGAATCTGCGTCTGCTGCCAGGATTATTGCACCTAGCCAGTCTAGTTCTGTTGCTGACAGTAAACTGGTATCGGAGGTGTCTTCTAGGGATCTTAGAAATGAATTGGAGGGGCAAAAATTGTCCTTGCCCCGATGTCTTGATGGAGATGATAAGCATCGAGCCAATGCATGCAGTGTGGTTGAATTAAGAAGGTCGATGCAAGATTCAAGCTCAACAATAAATGCTTCCCTTCCTTCTGGTGGTCACTCTTGTTCAGGATCAAGTCTTGATACTGAAACCTGGCACCTAGGGTCCCACGAAAGGCCCCTTATCTCATCATTGCCATTGGAGAATCCTCATTCAACTGCAAGTTCATTGTTGCAAAGTCCTGCTGCTGTGCAAGGTGAGAAAATGGCTAGCCAAGATCGATTGTCATCTACACATGATCTTCAGGACCGTGGAGATGGGTGCTGTCATAATTCCATTTGTAATGATGACCATAATCATATTACCGGGCATCATTTATTAGACCGTTCTAGCATCCTCCAGGGTTATCCCTTACAAACGCCTGTTAAGAAAGAAGCTAATGGGGACTTGAATTGCAGCAGTTCAACAACTGAGTTGCCTCTTTTGTCCCAGAAGATTGAACAAACCAATGATCATTACAGAATGCAATCACGGCATCCATTTGATTTGGAAAAAACATCCAGAAATGGTGACGTGAAACTGTTTGGGAAGATACTAACAAATTCTTCATCTGCCCAGAAGCCGAATCTGAGTACCAagggaaatgaagaaaacggTAACCATTTTCCCAAGCTCAGCAGCAAGTCTTCTACTCTGAAATTTAATGGCCATCACAATGTTGATGTTGGATCGacaattttgaagtttgacCGTAATGATTATCTGGGCCTCGAAAACGTTCCCATGAGGAGTTATGGGTACTGGGATGGGAACAGAATACAGACTGGTTTGGCATCGTTGCCTGATTCTAATCTCTTGCTTGCGAAATATCCTGCTGCTTTTAGCAATTATCCTACAAATTCTGCCAAATTGGATCCCCAGTCATTGCAGGCATTATCCAAGAATAATGAACAGCACCTTAGTGGTGTGTCTGCTTTTACAACTAGGGACGTTAATAGCAGCAATGGTGCGGTTGATTATCAGGTGTACAGAAGTAGGGATAGTCCAAAAGTACCATTTATGGTGGATGTGAAGCATCGCCAAGATGTGTATTCTGAGATGCAGAGAAGAAATGGTTTTCAAGCATTATCGAGTTTACAGCAGCAGGGAAGAGGCATTGTGGGAATGAATGGTGTTGGTAGGCCAGGTGTTATTGTTGGAGGATCAAGAGGCAGCGTCTCAGATCCTGTGGCTGCGATTAAAATGCATTATTCCAATTCTGATCAGTTTGGTCAAACAGGGAGTATTTTGAGAGAGGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTA 5054 0.4173 MPPEPLPWDRKESFFKERKHERSESLGSVARWRDSSHHGSREFNRWGSADFRRPPGHGKQGGWHLFSEESGHGYALSRSGDKMLEEENCRPSISVSRGDGKYSRNSRESRGSFSQRDWRGHSWETTNVSLNLSRRPPDMITDHRVLDDMLTYPSHPHSDFVNTWDEHHLKEQHDKMGGVNGMGTNQRCDRENSVGSLDWKPLKWTRSGSLSSRGSGFSHSSSCRSMGGTDSYEAKADLLPKNATAMESHSGDAAACTTSAAPSEETTSRKKPRLGWGQGLAQYEKKKVEGPDRSANKDGPVLSSSNLEACNFLGPGLVDKSPKITGFSDCASPATPSSVACSSSPGVDDKLFGKAPNVDNDISNLCSSPGPGFQNLEKLDVNSLGNLASSIYELLQYDDRSSMNKLLIWKADVSKVLEVTETEIDSLENELKSLNSGSGGSCPCPSALGSLREGNSAKSCEEHAGGSDKIYWPEPLHVVSSADPGVDKMPLSNNLCSSHANLMEEDIDSPGTATSKFIEPLPLVNIVSSGDMVQHDNCSGDLDRIHSTSMKCLMACTNKVEASLSAFGDGCMSKGIKDGVGATSGAAENVLCNTIIHSNKESANRACQVFDKLLPKDCCMTGNMGAVSDLNNISGTLIKRRLAERKQFANFKERVIAIKFRALHHLWKEDMRLLSVRKCRPKSHKKLEVSLRTTNNGYQKHRSSIRSRFAYPAGNLSLVPTSEIINFTGKLLSDSQIKVHRNNLKMPALILDEREKVTSRFVSSNGLVEDPLALEKERAMINPWTSEEKEIFMEKSAAFGKDFKKIASFLDHKTTADCVEFYYKNHKSDCFEKIRKKHGVSKLGKLFSANTDLVTTGKKWNCEINAASLEILSAASLMACHADRITSNQKICSSSSLFGGYGIMKTSRGEDGVLERSSSFDILGDERETVAADVLAGICNSLSSEAMSSCITSSIDPADGNKDRKYLKVNPVSKQPLTSAVTQNVDDETSSDESCGEMDPVDWTDEEKSAFLQAVSSFGKDFAMISQCVGTRSQDQCKVFFSKARKCLGLDLMRPRPGNDISQENDNAKSSGSDTDDAGVVETGSVVGTDKSSTKTDEDMPLPAKETCHKESNPVEARNSSTDLNNAKNTNGTEVDHKDAANVDNMVSDASKLLCGGDADILCSSGNSGSDNAHRALIMSANKEVEKDDFNKLGDVVLESASAARIIAPSQSSSVADSKLVSEVSSRDLRNELEGQKLSLPRCLDGDDKHRANACSVVELRRSMQDSSSTINASLPSGGHSCSGSSLDTETWHLGSHERPLISSLPLENPHSTASSLLQSPAAVQGEKMASQDRLSSTHDLQDRGDGCCHNSICNDDHNHITGHHLLDRSSILQGYPLQTPVKKEANGDLNCSSSTTELPLLSQKIEQTNDHYRMQSRHPFDLEKTSRNGDVKLFGKILTNSSSAQKPNLSTKGNEENGNHFPKLSSKSSTLKFNGHHNVDVGSTILKFDRNDYLGLENVPMRSYGYWDGNRIQTGLASLPDSNLLLAKYPAAFSNYPTNSAKLDPQSLQALSKNNEQHLSGVSAFTTRDVNSSNGAVDYQVYRSRDSPKVPFMVDVKHRQDVYSEMQRRNGFQALSSLQQQGRGIVGMNGVGRPGVIVGGSRGSVSDPVAAIKMHYSNSDQFGQTGSILREDESWGGKGDLGR 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00053 1684 ProSiteProfiles SANT domain profile. 1002 1049 IPR017884 -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 85 114 - -
Bva04g00053 1684 Pfam Myb-like DNA-binding domain 1002 1042 IPR001005 -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1322 1342 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1052 1139 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1060 1078 - -
Bva04g00053 1684 SMART sant 780 828 IPR001005 -
Bva04g00053 1684 SMART sant 999 1047 IPR001005 -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 205 228 - -
Bva04g00053 1684 SUPERFAMILY Homeodomain-like 1003 1049 IPR009057 -
Bva04g00053 1684 Gene3D - 760 832 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1443 1470 - -
Bva04g00053 1684 ProSiteProfiles SANT domain profile. 779 830 IPR017884 -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1114 1131 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 245 279 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 34 48 - -
Bva04g00053 1684 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1658 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 977 998 - -
Bva04g00053 1684 Coils Coil 410 437 - -
Bva04g00053 1684 SUPERFAMILY Homeodomain-like 767 827 IPR009057 -
Bva04g00053 1684 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1658 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1266 1290 - -
Bva04g00053 1684 Gene3D - 958 1054 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 17 66 - -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 251 265 - -
Bva04g00053 1684 CDD SANT 1003 1041 IPR001005 -
Bva04g00053 1684 MobiDBLite consensus disorder prediction 1092 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00053 Bva-Chr4 347564 358274 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g00053 Myb_DNA-binding 9.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00053 - - gmx:100810588 2094.32