Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00044 ATGGCTGCCAATACATTGATGAGCTACGGCATTTCAACCGCCTCTTCCTTCCCATCTGTTCTTTCTTCCTCAAAATCTAAATTCGTCACTGCAACTCCACTCCCTGCCGTTGGCAATGTCGCCGGACGTGTCTCCATGTCCGCCGATTGGATGCCCGGCCAGCCCCGGCCACCTTACCTTGACGGTTCAGCACCTGGTGACTTTGGATTTGACCCTCTTCGTCTAGGAGAAGTCCCAGAGAACCTTGAGAGATTCAAAGAGTCAGAGGTCTACCACTGCAGATGGGCTATGCTTGCTGTTCCAGGGGTTCTGATACCAGAAGCATTGGGTTTGGGCAACTGGGTGGAAGCTCAAAAGTGGGCTGCAGTTCCAGGTGGTCAAGCAACCTACCTGGGCAACCCAGTTCCATGGGGCTACCTCCCTACCATTTTGGTCATCGAGTTTCTTTCCATTGCCTTTGTGGAGCACCAACGCACGTTAGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGTGGTGCTTTTGATCCTTTGGGCTACTCTAAAGACCCTGCAAAGTTCCACGAATACAAAgtcaaggaaataaaaaatgGCCGTCTCGCTATGTTGGCTTGTGTGGGATTCGTTGTTCAACAATCAGCTTACCCTGGCACTGGACCACTGGAGAACTTGGCTTCTCACTTGGCTGATCCATGGCACAACAACATTGGAAACATCATTATCCCCAGATCGATTTATCcttg 740 0.4946 MAANTLMSYGISTASSFPSVLSSSKSKFVTATPLPAVGNVAGRVSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESEVYHCRWAMLAVPGVLIPEALGLGNWVEAQKWAAVPGGQATYLGNPVPWGYLPTILVIEFLSIAFVEHQRTLEKDPEKKKYPGGAFDPLGYSKDPAKFHEYKVKEIKNGRLAMLACVGFVVQQSAYPGTGPLENLASHLADPWHNNIGNIIIPRSIYP 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00044 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Bva04g00044 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Bva04g00044 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 24 236 IPR001344 GO:0009765|GO:0016020
Bva04g00044 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 24 236 - -
Bva04g00044 246 SUPERFAMILY Chlorophyll a-b binding protein 41 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00044 Bva-Chr4 299503 301488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00044 1 198 Chloroplast and Mitochondria Gene Families AT3G54890 78.894 1.51e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00044 K08907 - twl:120005362 435.647