Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00032 ATGTTTGTGGTAATGGGTTCCGTGGGGAGGAATCCAGAGAAGTGCTTAGATTCTCAATTATGGCATGCCTGTGCCGGTGCCTTGGTTCAAATGCCTCCTATCAACTCCAAAGTCTTCTATTTTCCTCAGGGCCACGCCGAGCATGCCCATGGGAAGGTAGATTTTGGGGAAACCCGAATTCCCTCGCTCATTCCCTGCAGGGTATCTGGTATAAAATACATGGCAGACCGTGATACAGATGAGGTCTACGTGAAGATGAGGTTGATTCCTctgagagaaaatgaaatggatTTTGAAGACGATTGTTTCTTGGGAAACAATGGGGTTGATAGTCAAGAAAAACCCAATTCATTTGCAAAGACATTGACCCAATCTGATGCCAACAATGGTGGAGGCTTCTCTGTGCCTCGTTACTGTGCAGAGACTATCTTTCCAAGGTTGGATTATTCAGCAGAACCTCCAGTTCAGACCATTATTGCCAAGGATGTGCATGGAGAGAGCTATAAGTTTAGGCATATATATAGAGGGACGCCTCGCCGCCATCTTTTAACCACTGGATGGAGCAATTTTGTGAACCAGAAGAAGCTTGTTGCTGGAGATTCCATTGTATTTCTGAGGGCAGAGAACGGGGATCTTTGTGTTGGAATAAGGAGGGCTAAGAAGGGAATTGGTGGTGGAACTGACTACTCATCTGGGTGGAACCAGGGTGGTCCTCTATTTTCAGGCCATTCTGGATTTTTGTGTGAGGATGAAAACTCATTAGCAAGAAGAAAGTGTGATGGGGAAGTGAAGGGAAGAGTTTCGGCTGAATCTGTTGTTGAAGCTGTAACTTGTGCTGTTAATGGCAGGCCCTTTGAGATAATCTACTATCCACGGGCCAGCACACCGGAGTTTTGCGTCAAGGCTTCTGCAGTGAGAGCTGCAATGCAAATACAATGGTGTTCTGGGATGAGATTCAAAATGCCTTTTGAAACTGAGGATTCCTCAAGGATAAGCTGGTTCATGGGAACCATAACTTCTGTCCAGGTTGCAGATCCCATTCGTTGGCATGATTCTCCTTGGCGTCTTCTTCAGGTAGTTTGGGATGAACCAGATTTACTTCAGAATGTTAAAAGTGTAAATCCTTGGTTGGTTGAATTAGTCTCAAACATTCCAACTTACCATCTCTCTGCATTCTCACCGGCAAGAAAGAAACCACGGTTTCAACAACAACCAGACTTTCCCCTCATCAACCAAGTTACAATGCCGCCATTCTCCAGCAATCTTGTCAATCACACTAACCCCTTAAGTAACTTTCAAAACCATAGTTCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGACTATCTCCACAGGATTTCCCCTTCAACAGCCTGCAACCAGGTCTACTTTCAAGGGGAATGCCACAGCTCGACTACGCTGTCCAGCCTCCGAGACCTCCTGGTGGTACCTATACAGGCAGCACCAAGGACAATGTTGATATATCTTGCTTGTTGACTGTGGGAAATCCTGgccaaaaattgaaggaaCCAAATGAGGCAAAAGCACCCCACATCTTGTTATTTGGCCAACTTATTCATACTGAGCAGCAGTCTTCAAACAGTTGCTCTGCAAGCACAACTGGGAATAGTTCATCAGAAGGGAATTCACTGAAGACACCAAATGCTTCTGATGGCACAGGTTCTGCTTTGCATCAAAATAGTCCAAATGAGAATTCCTCTGACGGAGGGTCTCCCTGGTACAAAGATCAGCATAAAACTGATCTTGGCACCGAAAATGTCAACATTTTATGTTTGGCTTTGTA 1808 0.4458 MFVVMGSVGRNPEKCLDSQLWHACAGALVQMPPINSKVFYFPQGHAEHAHGKVDFGETRIPSLIPCRVSGIKYMADRDTDEVYVKMRLIPLRENEMDFEDDCFLGNNGVDSQEKPNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGESYKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTDYSSGWNQGGPLFSGHSGFLCEDENSLARRKCDGEVKGRVSAESVVEAVTCAVNGRPFEIIYYPRASTPEFCVKASAVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTITSVQVADPIRWHDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNIPTYHLSAFSPARKKPRFQQQPDFPLINQVTMPPFSSNLVNHTNPLSNFQNHSSAGIQGARHAQFGLSPQDFPFNSLQPGLLSRGMPQLDYAVQPPRPPGGTYTGSTKDNVDISCLLTVGNPGQKLKEPNEAKAPHILLFGQLIHTEQQSSNSCSASTTGNSSSEGNSLKTPNASDGTGSALHQNSPNENSSDGGSPWYKDQHKTDLGTENVNILCLAL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00032 602 ProSiteProfiles B3 DNA-binding domain profile. 118 220 IPR003340 GO:0003677
Bva04g00032 602 SUPERFAMILY DNA-binding pseudobarrel domain 109 219 IPR015300 -
Bva04g00032 602 CDD B3_DNA 117 218 IPR003340 GO:0003677
Bva04g00032 602 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva04g00032 602 PANTHER AUXIN RESPONSE FACTOR 16 11 571 - -
Bva04g00032 602 SMART B3_2 118 220 IPR003340 GO:0003677
Bva04g00032 602 Gene3D - 312 386 - -
Bva04g00032 602 MobiDBLite consensus disorder prediction 533 587 - -
Bva04g00032 602 MobiDBLite consensus disorder prediction 533 581 - -
Bva04g00032 602 Gene3D - 116 220 IPR015300 -
Bva04g00032 602 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 571 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva04g00032 602 Pfam B3 DNA binding domain 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00032 Bva-Chr4 208526 211737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00032 1 586 B3 DNA Binding Superfamily AT4G30080 58.725 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva04g00032 B3 5.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00032 - - gmx:100803053 926.006