Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00024 ATGGAAGTTTCCGGGGTTAACTGCAGCAATGGCGCTGGCAATGGTCCCTTGAAGCTATGCAGTGGGagtattagtaataataatactaataatgaCCCGCTGAACTGGAACATGGCTGCGGATTCACTGAAAGGTAGCCACCTAGATGAGGTAAAGCGCATGGTGGAGGAGTACCGGAAGCCAGTTGTCCGTTTGGCGGGAAAGAGCCTCACCATATCTCAGGTGGCTGCGATAGCCAACCACGATGCCGGTGTGGAGGTGGAGCTCTCGGAGGAGGCACGCGCCGCCGTCAAGGCCAGCAGTGATTGGGTCATGGAGAGCATGAACAAAGGCACGGATAGTTATGGAGTCACCACGGGGTTTGGTGCTACCTCGCATAGGAGAACCAAACAGGGAGGAGCACTTCAAAGGGAACTCATAAgGTTCTTGAATGCCGGCATCTTTGGCAATGACACAGAAGCGTGCCACACTTTGCCCCACTCGGCCACAAGAGCTGCTATGCTGGTCCGAATCAACACCCTCCTTCAAGGGTATTCAGGCATCAGATTTGAGATCTTGGAAGCAATCACCAAGTTTCTGAACCATAACATAACCCCATGCTTGCCTCTGAGGGGCACAATCACTGCCTCTGGTGACCTTGTGCCCTTGTCTTACGTTGCCGGTTTATTGATTGGCAGACCCAACTCCAAGTCCATTGGACCTGATGGAAAAGTGCTGAGTGCTACTGAGGCATTTGAACTAGCTGGAATTAATGGTGGGTTTTTCGATTTGCAACCCAAAGAAGGTTTGGCACTAGTGAATGGCACTGCAGTGGGGTCTGGCTTGGCTTCCATGGTTCTTTTTGAGGCAAACatattctctcttctctcgGAGATCTTGTCTGCAATTTTCGCTGAAGTTATGCAAGGAAAACCAGAATTTACAGACCACTTGACACATAAATTGAAGCACCACCCAGGACAAATTGAGGCTGCAGCTATAATGGAACACATTTTGGATGGAAGCTCTTATGTTAAGGCTGCACAGAAGTTGCATGAGATTGATCCTCTGCAGAAGCCTAAACAGGACAGATATGCTCTCAGAACATCTCCTCAATGGCTTGGACCACATATTGAAGTCATAAGGCAAGCAACAAAGATGATTGAGAGAGAGATTAACTCTGTTAATGATAATCCATTGATTGATGTGTCAAGGAACAAGGCACTTCATGGTGGGAATTTCCAAGGAACCCCAATTGGTGTTTCTATGGATAACACCCGTTTGGCCATTGCTTCAATTGGGAAACTTATGTTTGCTCAATTCTCTGAGCTTGTGAATGATTTCTACAACAATGGGTTGCCTTCAAATCTGTCTGCAAGCCGCAATCCAAGCCTTGACTATGGCTTCAAAGGGGCTGAAATTGCAATGGCATCTTACTGCTCTGAACTTCAATTCCTTGCCAACCCTGTCACCAACCATGTCCAGAGTGCAGAGCAGCATAACCAGGATGTGAACTCTCTGGGCTTGATTTCCTCAAGAAAAACAGCTGAAGCTGTGGACATTTTGAAGCTTATGTCCTCTACTTTCCTAGTTGCCTTGTGCCAAGCCATTGACCTGAGGCATTTGGAAGAAAACTTGAAGAACACTCTGAAAAACACCGTTAGCCAAGTAGCCAAGAGAGTCCTAACATTGGGTGTCAATGGCGAGTTGCATCCATCGAGGTTCTGTGAAAAGGACTTGCTGAAAGTGGTAGACCGCGAGCATGTCTTTGCTTACATTGACGATCCCTGCAGTGCAACTTACCCACTAATGCAGACGCTGAGACAGGTGCTAGTTAATCACGCATTGGAAAATGGTGAGGCAGAGAAGAATTCAAGCACTTCAATCTTCCAAAAGATCGCAGCTTTTGAGGAAGAGCTGAAGACCCTTTTGCCCAAAGAAGTGGAAAGTGCTAGGATTGAGGTTGAGAATGGAAAACCTGCCATTCCAAACCAGATCAAGGAATGCAGGTCTTACCCATTATACAAATTTGTGAGAGAAGAGTTGGGGACAAGTTTGCTGACAGGTGAGAAAGTTAGGTCACCTGGTGAAGAGTTTGATAAGGTGTTCTCAGCAATGTGTGAAGGGAAGTTGATTGATCCAATGTTGGACTGCTTGAAGGAGTGGAATGGTGCTCCTCTACCAATCTCTTA 2171 0.4625 MEVSGVNCSNGAGNGPLKLCSGSISNNNTNNDPLNWNMAADSLKGSHLDEVKRMVEEYRKPVVRLAGKSLTISQVAAIANHDAGVEVELSEEARAAVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQRELIRFLNAGIFGNDTEACHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGKVLSATEAFELAGINGGFFDLQPKEGLALVNGTAVGSGLASMVLFEANIFSLLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPHIEVIRQATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKNTLKNTVSQVAKRVLTLGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQTLRQVLVNHALENGEAEKNSSTSIFQKIAAFEEELKTLLPKEVESARIEVENGKPAIPNQIKECRSYPLYKFVREELGTSLLTGEKVRSPGEEFDKVFSAMCEGKLIDPMLDCLKEWNGAPLPIS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00024 723 Gene3D Fumarase/aspartase (Central domain) 270 718 - -
Bva04g00024 723 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 25 722 - -
Bva04g00024 723 Pfam Aromatic amino acid lyase 70 547 IPR001106 -
Bva04g00024 723 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 32 713 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bva04g00024 723 CDD PAL-HAL 68 533 IPR001106 -
Bva04g00024 723 Gene3D - 536 657 IPR023144 -
Bva04g00024 723 SUPERFAMILY L-aspartase-like 32 722 IPR008948 GO:0003824
Bva04g00024 723 PANTHER HISTIDINE AMMONIA-LYASE 25 722 IPR001106 -
Bva04g00024 723 Gene3D - 23 269 IPR024083 -
Bva04g00024 723 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 205 221 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00024 Bva-Chr4 145417 149721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00024 1 722 Monolignol Biosynthesis Gene Families AT2G37040 81.931 0.0 1247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00024 K10775 - rcu:8273543 1263.83