Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00021 ATGTGCGGCTCCAAAAACAGCACGCAAGTAATCGAATCCCATAGCCACCGTCCCCGAATCCCAAGATCGTCTTCATCGCAACAACAACGACATCCtcccaatttttcttctttcagcAATTCCATCACTGATTCCAGAAGCTACAACAAGGATTGGTCCAAATCCTCTGCTTCAAGTGGCAACTCCCTCGCTAGTCTTAAGGATTCCTTGCCGGAGAATCCCCACATTTTCGACTTCTCCGACATCCGCTCCGCCACCGCCAACTTCCTATCCGGTAAGTTCTCCTCGTCTTCCTCTTCCGCCTCTTGGCGATGCTCCATTCGGAACAAGGACGTTGTCGTCTTTCAGCGTAAGTTTCGGCGCCGCTTGGAGTTGTCCGAGCTCCGGGAACGACTAGCGGTGATTTGCCGGAGCCATCACAGTAGTTTGGTCAAACTGCTTGGGGCATCGGTCTCCGGAAACTACATTTACCTTGTGTATGAGTATGTTCGCGGTGTGAGTCTCCCGGAGTGTCTCCGAAATCGAAGGAACCCCAATTTCACCGTGCTATCATCTTGGCTTTCCAGGATGCAAGTTGCCACCGATCTCGCTCACGGGCTTGATTATATCCACCATTTCTCGGGTCTGAACTCGAATTTCATCCACAACCATATCAAAAGCTCTAGTATCATCGTCACGGAGGAGAATTTGAGTGCAAAAATCTGCCATTTTGGGACCTCAGAATTGTGCGGTGAGGTGGTTGCAGAAACTCCATCTGGCTCCGATTCTGGGAAAATCATGGAGCTGAAGAGGTCCGGTAGTCGAAACATGAAATTAGAAGGGACAAGAGGCTATATGGCGCCGGAGTTTCAGATCACTGGGGTTGCGACGCAAAAGACAGATGTGTATGCTTTTGGAGTCGTAATTTTGGAGCTCCTGAGCGGAGAAGAGGCATTAAAATACGAATTTGACGACGGCGGTAGTGGCGGGTACAGAAGGGTGAGTGTGGTGGCGACTGCGAGACAGGCTCTGGAAGAAGACGGTGGTGTGAGGAAGTGGGTGGACAAGAGGCTGAAGGATTCATTTCCGGTAGACGTGGCGGAGAAAATGATCCGAATGGGCTTGGAGTGCGTGGAGGAGGATCCGAATGAAAGGCCGGATATGGGTCGGGTGGCAGTTTCTGTATCCAAGTTGTATTTGGAGTCGCAGAAGTGGGCGGAGAAGATGGGAACTCCTATTGACTTTTCGGTCTCATTGGCGCCACGGTG 1247 0.5044 MCGSKNSTQVIESHSHRPRIPRSSSSQQQRHPPNFSSFSNSITDSRSYNKDWSKSSASSGNSLASLKDSLPENPHIFDFSDIRSATANFLSGKFSSSSSSASWRCSIRNKDVVVFQRKFRRRLELSELRERLAVICRSHHSSLVKLLGASVSGNYIYLVYEYVRGVSLPECLRNRRNPNFTVLSSWLSRMQVATDLAHGLDYIHHFSGLNSNFIHNHIKSSSIIVTEENLSAKICHFGTSELCGEVVAETPSGSDSGKIMELKRSGSRNMKLEGTRGYMAPEFQITGVATQKTDVYAFGVVILELLSGEEALKYEFDDGGSGGYRRVSVVATARQALEEDGGVRKWVDKRLKDSFPVDVAEKMIRMGLECVEEDPNERPDMGRVAVSVSKLYLESQKWAEKMGTPIDFSVSLAPR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00021 415 Gene3D Phosphorylase Kinase; domain 1 50 162 - -
Bva04g00021 415 Pfam Protein kinase domain 126 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00021 415 Gene3D Transferase(Phosphotransferase) domain 1 165 406 - -
Bva04g00021 415 SUPERFAMILY Protein kinase-like (PK-like) 117 389 IPR011009 -
Bva04g00021 415 MobiDBLite consensus disorder prediction 1 43 - -
Bva04g00021 415 ProSiteProfiles Protein kinase domain profile. 83 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g00021 415 PANTHER OS09G0572100 PROTEIN 1 415 - -
Bva04g00021 415 PANTHER OS09G0572100 PROTEIN 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00021 Bva-Chr4 131519 133232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00021 72 403 Receptor kinase-like Gene Family AT1G51940 31.361 4.60e-46 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva04g00021 Pkinase 4.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00021 - - csv:101206289 511.916