Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00015 atGAATAACTCAGTTTCAGATAACAGTTTTTACATTGACAGTGATGAAGATGAGGAAAAGGAGCTCAATAAAGGTGAAGAGGAGAACGGAAACGACTCAGATTCTTCCAATTACTCAAACGAAAACCAGAATCAGAACAAACCTAGTTCTTACAACACCTCATGGCCTCAGAGTTACAGGCAGTCAATTGATCTATATAGTAGTGTACCATCACCAAGTATTGGATTTCTAGGCACCCCTTCATTGTCGAGATTAAGCagttcctttctttcttcatcattAACAAGAAGGCACACTCCTGAGACACTACATTCAGTAACAAAACCTCTGTTACAACCTCCAGTGGAGGAGCACCAGAAACGTAGTTCGCATTCCTTGCTTCCTCCTATTCCATCAAGGAGGTCATCAATTAGGAAGGATTCCAAGGTTTCTCACGAAGTTCCAATTTCTCGCCACTGCTCTTATGGACAAGCTGTGCTTAATGGCATAAATGTTCTCTGTGGTGTGGGAATCCTTTCTACTCCTTATGCTGCTAAAGAAGGTGGATGGCTTGGGCTGTCTATCTTGTTCATTTTTGCAATTATTTCCTTCTACACTGGGATCCTCTTGCGTTACTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCCGACATTGGCCAAGCTGCTTTTGGTCGCACAGGGCGTATTGCCATTTCGATAATATTATACGTGGAATTATATGCTTGTTgcattgaatatataattttggagAGTGACAACTTGTCCTCGCTATTTCCAAATGCGCACATAAATTTGGGtggaattgaattgaattctcACATCCTGTTTGCACTGATGACTTCCTTGGCTGTTCTTCCTACTGTTTGGCTTCGTGACCTAAGTATTCTCAGTTACATTTCAGCTGGTGGGGTTATTGCATCAATTTTGATTGCTTTCTGCCTGTTCTGGGTTGGCCTTGTGGATGAAGTTGGCTTTCATAGTAAAGGGACAACCACACTGAATCTTGCAACTCTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCAAACATCTATACATCAATGGCAAATCAAAACCAGTTTCCTGCAGTACTCTTGGCATGTTTTGGTATATGTACCTTACTATATGCTGCAGTGGCTGTTATGGGGTATACAATGTTTGGGGAATCTATTCTTTCTCAGTTCACCCTTAACATGCCCCAAGATTTAGTCGCCACCAAGATTGCTGTCTGGACTACGGTGGTCAATCCGTTTACCAAATATGCTTTGACCATATCTCCGGTAGCAATGAGTCTTGAGGAATTGATACCGTCAAACCATTCCAAGTCTTACATATACTCCATCTTCATCAGAACAGGGCTAGTAGTTTCTACCTTGGTAGTTGGTCTTATGGTTCCCTTTTTTGGTCTGGTGATGTCTTTAATCGGATCTTTGCTCACGATGCTAGTTACCTTGATACTTCCCTGCGCTTGTTTCCTAAGTATCTTGCGGGGCAAAATCTCACGGTTTCAGGTGGCACTTTGTATTATAGTAATCACAGTAGGTGTTGTATCATCTGCCTTTGGAACATACTCAGCCCTCTCCAAGATTGTTGAAACCGGCATAATCCCCGCCTCCACAATCTACAGTGTCAACGGCTTCATTCTCTCGTCAAAGGCCCCTTTCTTTCCTTGGACGccggaaacgaagaaagttaTATACTTTTCACTCTCGCCCTCTCCATTTCTGTCGACGTTGGCTCTCTACGACATGTCCGAAGCCCTTCGGATTTGGCCTTCATCTGGGTCTCTGAGATCGACATGCCCCTCTGATTCTTCTCGCGTACTTCTAAGtggattttcaaattcattggCTTTCAGCTTCACATTACCTTTCTCTTCAAGTTCTTCTCGTGAAATTGCCAGAACCTCAGTTCTGACTGCGTTAAGCCAAGAAGGGTCTTTGCAGGACCTCGATGATTCTCCTGTTTCGGTTCAGCTGCAACCCATTTGCAGCGAGAGCCAGTTCGATCGGGTTATTGCGGAGGCACAGCAACTTGAAGATGCGGTGATAATTCTTTGGATGGCAACTTGGTGCAGGAAATGCATATATCTAAAGCCAAAACTTGAAAAGTTGGCTGCAGAATATTATCCAGGGTTGCGATTCTACTGTGTTGATGTTAATTCAGTTTCACATAAAATTGTTGCTCATGCTGGTGTGACAAAGATGCCGACTATACAACTGTGGAAGGATGGCCAAAAACAAGCAGAAGTCATTGGTGGCCATAGGGCAGACTTGGTTATAAATGAAGTTCGGGAGATGATTGAAAATGATCAGAGCTCCATTTG 2351 0.4194 MNNSVSDNSFYIDSDEDEEKELNKGEEENGNDSDSSNYSNENQNQNKPSSYNTSWPQSYRQSIDLYSSVPSPSIGFLGTPSLSRLSSSFLSSSLTRRHTPETLHSVTKPLLQPPVEEHQKRSSHSLLPPIPSRRSSIRKDSKVSHEVPISRHCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILFIFAIISFYTGILLRYCLDSEPGLETYPDIGQAAFGRTGRIAISIILYVELYACCIEYIILESDNLSSLFPNAHINLGGIELNSHILFALMTSLAVLPTVWLRDLSILSYISAGGVIASILIAFCLFWVGLVDEVGFHSKGTTTLNLATLPVAVGLYGYCYSGHAVFPNIYTSMANQNQFPAVLLACFGICTLLYAAVAVMGYTMFGESILSQFTLNMPQDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHSKSYIYSIFIRTGLVVSTLVVGLMVPFFGLVMSLIGSLLTMLVTLILPCACFLSILRGKISRFQVALCIIVITVGVVSSAFGTYSALSKIVETGIIPASTIYSVNGFILSSKAPFFPWTPETKKVIYFSLSPSPFLSTLALYDMSEALRIWPSSGSLRSTCPSDSSRVLLSGFSNSLAFSFTLPFSSSSSREIARTSVLTALSQEGSLQDLDDSPVSVQLQPICSESQFDRVIAEAQQLEDAVIILWMATWCRKCIYLKPKLEKLAAEYYPGLRFYCVDVNSVSHKIVAHAGVTKMPTIQLWKDGQKQAEVIGGHRADLVINEVREMIENDQSSI 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00015 783 MobiDBLite consensus disorder prediction 112 138 - -
Bva04g00015 783 PANTHER OS05G0424000 PROTEIN-RELATED 26 541 - -
Bva04g00015 783 SUPERFAMILY Thioredoxin-like 668 777 IPR036249 -
Bva04g00015 783 PANTHER AMINO ACID TRANSPORTER AVT1B 26 541 - -
Bva04g00015 783 MobiDBLite consensus disorder prediction 1 55 - -
Bva04g00015 783 Pfam Thioredoxin 673 770 IPR013766 -
Bva04g00015 783 ProSiteProfiles Thioredoxin domain profile. 645 781 IPR013766 -
Bva04g00015 783 CDD TRX_family 675 777 - -
Bva04g00015 783 Pfam Transmembrane amino acid transporter protein 154 533 IPR013057 -
Bva04g00015 783 Gene3D Glutaredoxin 658 774 - -
Bva04g00015 783 MobiDBLite consensus disorder prediction 32 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00015 Bva-Chr4 101732 112412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00015 1 477 Amino Acid or Auxin Permease AAAP Family AT2G39130 74.021 0.0 729