Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02529 ATGGGGATTTGTTTCAGCATTGAAGAGGACCAAAAGCTCCACTCTAATACAAATTATAGAGGAGATGAGTCTGCTGCATCAACAACTAAGCAAGACAAGAGCACGAGCAATGCTCTGTTAGCTCCCATGAATATAACAGATCTTCGCCAATGTCCTGGCTATAGTAATGTTGACATATTTACATACGAGGAGATGAGACTGGCCACAAAGCACTTTCGTCCAGACTTAATTCTGGGAGAAGGTGGTTTTGGAGTTGTATATAAAGGAGTGATAGATGCAAATGTGAGGCCAGGTTACAAGAGCACTCAAGTTGCCATTAAAGAGCTCAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCAGAAGTTAACTATTTAGGTCAATTCAGTCACCCAAATCTTGTGAAGCTCATTGGATACTGCTGCGAGGATGAACATCGATTATTGGTCTATGAATACATGGCTAGTGGGAACTTGGAGAAGCATCTTTTTCGCAGAGTGGGCTCAACGCTGACTTGGTcaaaaagaatgaagattGCTTTAGATGCTGCAAAAGGGCTTGCTTTTCTTCATGGCGCAGAAAGGCCAATCATATATCGTGACTTCAAGACATCAAATATATTGCTAGATGCGGATTTCAATGCCAAGCTTTCAGACTTTGGTCTTGCAAAGGATGGGCCTATGGGGGACCAAACCCATGTCTCAACACGAGTAATGGGCACATATGGATATGCTGCTCCTGAGTATGTGATGACTGGGCATTTAACAGCTCGAAGTGATGTGTATGGCTTTGGGGTAGTGCTACTCGAGATGCTCATTGGAAGGAGGGCATTGGACAAGTGTAGACCGAGCCGAGAACACAACTTGGTTGAGTGGGCACGCCCACTATTGAACCATAATAAGAAACTCCTGAGAATTTTGGATCCTAGAATGGAAGGCCAATATTCAACTAGAACTGCAATAAAGGTGGCTCATTTGGCATACCAATGCCTTAGTCAAAACCCAAAAGGCAGGCCACTCATGAGCCAGGTTgttgaaattcttgaaaattatCAATCTAAGGGAGAAAATGAGGAAGGACAAATGCTTCATAATGGTGGTAGTAGTGTAACTATTTATGAGGTTCCAAAGGGCACCACCGGCACTGTTACTCctacaaaggaaaaaagtcaagcaaagagagagaaaagcagAAGTGAACCTTCGGATGACTACAATTTATGTAGTCCTTCACCAGACTCTATGGCACCAGAGAAATCAGCTTCTTCCAGAAGTTG 1280 0.4141 MGICFSIEEDQKLHSNTNYRGDESAASTTKQDKSTSNALLAPMNITDLRQCPGYSNVDIFTYEEMRLATKHFRPDLILGEGGFGVVYKGVIDANVRPGYKSTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGNLEKHLFRRVGSTLTWSKRMKIALDAAKGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRALDKCRPSREHNLVEWARPLLNHNKKLLRILDPRMEGQYSTRTAIKVAHLAYQCLSQNPKGRPLMSQVVEILENYQSKGENEEGQMLHNGGSSVTIYEVPKGTTGTVTPTKEKSQAKREKSRSEPSDDYNLCSPSPDSMAPEKSASSRS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02529 426 MobiDBLite consensus disorder prediction 372 426 - -
Bva03g02529 426 Gene3D Transferase(Phosphotransferase) domain 1 155 372 - -
Bva03g02529 426 MobiDBLite consensus disorder prediction 372 388 - -
Bva03g02529 426 MobiDBLite consensus disorder prediction 404 426 - -
Bva03g02529 426 SUPERFAMILY Protein kinase-like (PK-like) 52 350 IPR011009 -
Bva03g02529 426 CDD STKc_IRAK 78 351 - -
Bva03g02529 426 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 22 396 - -
Bva03g02529 426 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
Bva03g02529 426 PANTHER OS01G0588500 PROTEIN-RELATED 22 396 - -
Bva03g02529 426 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Bva03g02529 426 MobiDBLite consensus disorder prediction 389 403 - -
Bva03g02529 426 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Bva03g02529 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Bva03g02529 426 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02529 Bva-Chr3 21267321 21271559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02529 60 349 Glycoside Hydrolase AT3G07070 50.512 4.44e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva03g02529 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02529 - - gmx:100800465 642.114