Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02511 ATGCAGCTGGGCGACCAAAGTGTATTAGAGACCTCCTCCGGCGAAGCCGTGATGGCGGTGACGGCAGCCCCAGAAGGCGACGACGGCGCTGGTGGTGAGATAATTGGCATGGATACAAATTCGGGTGAAGATGAGAAAGGTATAAGAGGAGATGAACTGGGTGACAAGATCAGCAGTGGAGGAAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCAGATATGGACGCTGTGTTTCGAGATTCAAGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAAATGGCAGAGCTTGGATACCACCGAACCGCGAAGAAGTGCAAGGAGAAATTCGAGAACGTGTACAAGTACCACAGGAGAACAAAAGAGAGCAGAAGTGGGAAATCAGAAGGAAAATCATACAAATTCTTTGATCAATTACAAGCCCTTGAGAACCAATTCACAGTGTCTAATATTCATCATCAGCCATCAAAACCACAACAGGTAATATTGGCAGCAACAAGACCTAGTGATATTAGTACAACTTTTTCGTATGTCACCACTGTTCCAACCACAAACCCTACAGTCATTTCTCCGCCGCCAACCAATGCTACCAACATAACTTCTTCTACAGCAACAACCAACCCTAGAATCCCATCACCGCAAAGTTTTGCTGtccctttttttttgccaaacaTGAACAATCTCTTCTCCACCACCTCCACTTCTTCTTCCACCGCTTCCGACGAAGACTTGGAAGAGAGGTacaggaagaaaaggaaatggaaagaCTACTTCAGGAGGCTCACGAGGCAGGTGTTGGCCAAGCAAGAGGAAATGCACAAGAGGTTCTTAGACGCCATTGATAAGGGCGAACGCGAGCGTGTGGCGCAACAAGAAGCTTGGAGAATGCAAGAAATGGCCAGGATCAATAGAGAGCATGAAATTCTTGTCCAAGAACGATCAGCAGCAGCTGCAAAGGATGCTGCAGTTATTGCTTTCTTACAGAAATTATCTGGGCAGCCAAATCCAACGCAGGTTGGCAATTGCCTCCAGCAACAACCGCCTCCTTTACAGCCACAGACACTGACACCGCCACTGATGCCAGCACCGCAACCAATATCACAAGTACAACCCCAGCAGCTGGCCACGGCGCCGCCACCACCAAACCACAATTTTGAAATCCAGAAAATGAACAATGGTGACAGTGCTGCTGGAACTCTAACGAACTCATCTAGGTGGCCAAAGGTGGAAGTTCATGCTTTGATAAGGCTGAGAACGACTCTTGACAGTAAGTATCAAGAGAATGGGCCAAAGGGTCCATTATGGGAGGAGATATCAGCTGGCATGCAGAGGCTTGGATACAACAGAAGTGCTAAAAGATGCAAAGAGAAGTGGGAGAATATTAACAAGTACTTcaagaaagtgaaagaaagcAACAAGCAAAGGCGTGAGAATAGTAAGACATGCCCTTATTTCCATGAGCTTGATGCTTTGtacaaagaaaagagtaaaacCCAGAATCTATTTGGTGCTTCATTTGATAGTATGAAGTCGAATGAGATGATGGAGCCATTGATGGTGCAACCGGAGCAAGAATGGAGGCCTCCTCCACAATATGAGCAGCAGCAGGCAATGGAAGAGGGGATGGTAGGCGAAAATGCAAGTgaatatcaagaaaaagaaagagatgatcatgaagatgaagaagaagaagacgatGACATgggagaagatgaagatagtgtggaagatgaagaaggagGAGCTGGCAGTTATGAGATTGCGACAAATAAACTTGCTTCAGTGGACACGGTTGAATG 1817 0.4271 MQLGDQSVLETSSGEAVMAVTAAPEGDDGAGGEIIGMDTNSGEDEKGIRGDELGDKISSGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKMAELGYHRTAKKCKEKFENVYKYHRRTKESRSGKSEGKSYKFFDQLQALENQFTVSNIHHQPSKPQQVILAATRPSDISTTFSYVTTVPTTNPTVISPPPTNATNITSSTATTNPRIPSPQSFAVPFFLPNMNNLFSTTSTSSSTASDEDLEERYRKKRKWKDYFRRLTRQVLAKQEEMHKRFLDAIDKGERERVAQQEAWRMQEMARINREHEILVQERSAAAAKDAAVIAFLQKLSGQPNPTQVGNCLQQQPPPLQPQTLTPPLMPAPQPISQVQPQQLATAPPPPNHNFEIQKMNNGDSAAGTLTNSSRWPKVEVHALIRLRTTLDSKYQENGPKGPLWEEISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRRENSKTCPYFHELDALYKEKSKTQNLFGASFDSMKSNEMMEPLMVQPEQEWRPPPQYEQQQAMEEGMVGENASEYQEKERDDHEDEEEEDDDMGEDEDSVEDEEGGAGSYEIATNKLASVDTVE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02511 605 MobiDBLite consensus disorder prediction 1 62 - -
Bva03g02511 605 CDD GT1 410 475 - -
Bva03g02511 605 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 4 594 - -
Bva03g02511 605 CDD GT1 62 127 - -
Bva03g02511 605 MobiDBLite consensus disorder prediction 39 53 - -
Bva03g02511 605 Gene3D - 412 473 - -
Bva03g02511 605 Gene3D - 64 125 - -
Bva03g02511 605 Pfam Myb/SANT-like DNA-binding domain 62 148 IPR044822 -
Bva03g02511 605 Pfam Myb/SANT-like DNA-binding domain 410 497 IPR044822 -
Bva03g02511 605 ProSiteProfiles Myb-like domain profile. 62 120 IPR001005 -
Bva03g02511 605 SMART sant 60 122 IPR001005 -
Bva03g02511 605 SMART sant 408 470 IPR001005 -
Bva03g02511 605 MobiDBLite consensus disorder prediction 529 605 - -
Bva03g02511 605 PANTHER - 4 594 - -
Bva03g02511 605 ProSiteProfiles Myb-like domain profile. 408 468 IPR001005 -
Bva03g02511 605 MobiDBLite consensus disorder prediction 561 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02511 Bva-Chr3 21164431 21166905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02511 51 532 Trihelix Transcription Factor Family AT1G76880 52.121 9.48e-149 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva03g02511 Myb_DNA-bind_4 3.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02511 - - gsj:114370603 677.167