Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02510 ATGCTGGGGGACTCATCAGCTGTGTTGGTAGAAGCAGCAAGCTCTGGAGATGCAGTGGCGGTGCCACCCCTCGCTGCatcaacagcagcagcaacaacaacGACAACCCATGACGGTGCTGAGTCGGTGGCGGCAACAGCAGCTGGTGGATCAAATTCAGGTGATGAAGATAGAGAAAGAGGCGAAGATGGTGACCGAAGTTTCGGAGGTAACCGGTGGCCTCGCCAGGAAACCTTGGCTCTTTTGAAGATACGGTCAGATATGGACGTTGCGTTTCGAGATGCCAGCGTTAAGGGTCCTTTGTGGGATGAAGTTTCCAGGAAGCTAGCAAAGCTTGGGTATCATAGAAGTGCCAAGAAGTGTAAAGAGAAATTCGAGAACGTTTACAAGTACCATAAGAGAACAAAAGAAGGCAGAAGCGGGAAATCAGACGGTAAAACCTATCGGTTTTTTGATCAATTAGAAGCTCTTGAACATAATCCCTCATTTCAATCAACAACGTCTGCAAAAGCGGAAACAGCAGTACCAGTATCAGTAGTAGCAGCATCAGCTTCAACAGTTCCATCAACAACAGTGCTAGTGCCAACAATGGCAGCAGTGACTAATACCACTCCTCATGCCACTGTTCCATCAACAACAACTACACTCCCTGTGCCTATCACGGCTCAAGGGATTGTCACCCCACCATCGATAAATCTCACAGTTCCTTTTTATTCGCCCATCAATTTCGCCCCATCAACAGCAAACCCTACGCTCCCATCTTCGTTTCCCAGTATCCCAACTGATCTTTTATCCAATTCTAGTTCTTCTTCCACCTCTTCCGACGAAACGCTGGAAGGGCGTAGAAAGAGAAAGCGAAAATGGAAAGATTTCTTTGAGAGGTTAATGAAGGAGGTAATAGAGAAGCAAGAGGACTTACAGAAGAGATTCTTGGAAGCAATAGAGAAGCGTGAGCACGAGAGGATGGTTCGAGAGGAAGCTTGGAGAATGCAGGAAATGGCGAGAATCAATAGAGAGCGAGAAATTTTGGCACAGGAAAGATCCATTGCGGCTGCGAAAGATGCAGCCGTAATGGCATTTTTGCAAAAGATAGCGGAACAGCAGAATCTTGGCCAGGCATTGAATAACATTAATATTCCTCAGCCTCAGCTGCAACCACAACCGCAGCCGGTGCTGCAGCAAGTTGCTATCCAGCAACATTCTCAGCTTCATGCGGGCCCACCTGCCGTGATTCCACCGGCCCCACAAGCAGTGCCGCAGCAGCAGGTAACGAGTATGGAAATTACCAAAACGGATAATGGGGATAATTTCATGGCCCCGAGTTCTTCGAGATGGCCAAAAGTGGAGGTTCAGGCATTGATAAAGCTAAGAGCAGACCTGGACGCTAAGTACCAAGAAAATGGACCAAAAGGCCCTCTATGGGAAGAGATCTCGTCAGAGATGAGAAAGATTGGGTACAACCGCAGCGCAAAAAGATGCAAAGAGAAATGGGAAAATATTAACAAGTACTTCAAGAAAGTGAAGGAAAGCAATAAGAAAAGACCAGAAGATGCGAAGACATGCCCGTATTTTCATCAACTGGATGCTCTAtatagagagaaaaacaagCTGGATAATCCAACCTCATCGCTTAACCAATTGAATAAGCCACTGGCGAACATCAACGCGATGACGCCGTTGATGGTGCGACCGGAGCAGCAATGGCCGCCTCAGCAAAACACGCGGCCGGGGGCTGACGTCACCATGGAAGAAGCCGAAAACCATCCAATGAACCGGCACAGCGAGGATGACGGTGAAGAGGAAGACGAAGATAAGGATGGAGACGAAGATGAGGAAGAAGACGAAGGAGGTGGTAACTATGAGATAGTGGCAAGCAAGCCAGCTTCAGTTGGTGCAGGTGCAGGTGCAGGAGCAGGAGGAGAGTG 1925 0.4738 MLGDSSAVLVEAASSGDAVAVPPLAASTAAATTTTTHDGAESVAATAAGGSNSGDEDRERGEDGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWDEVSRKLAKLGYHRSAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYRFFDQLEALEHNPSFQSTTSAKAETAVPVSVVAASASTVPSTTVLVPTMAAVTNTTPHATVPSTTTTLPVPITAQGIVTPPSINLTVPFYSPINFAPSTANPTLPSSFPSIPTDLLSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEDLQKRFLEAIEKREHERMVREEAWRMQEMARINREREILAQERSIAAAKDAAVMAFLQKIAEQQNLGQALNNINIPQPQLQPQPQPVLQQVAIQQHSQLHAGPPAVIPPAPQAVPQQQVTSMEITKTDNGDNFMAPSSSRWPKVEVQALIKLRADLDAKYQENGPKGPLWEEISSEMRKIGYNRSAKRCKEKWENINKYFKKVKESNKKRPEDAKTCPYFHQLDALYREKNKLDNPTSSLNQLNKPLANINAMTPLMVRPEQQWPPQQNTRPGADVTMEEAENHPMNRHSEDDGEEEDEDKDGDEDEEEDEGGGNYEIVASKPASVGAGAGAGAGGE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02510 641 MobiDBLite consensus disorder prediction 28 49 - -
Bva03g02510 641 Gene3D - 445 506 - -
Bva03g02510 641 Gene3D - 73 134 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 259 283 - -
Bva03g02510 641 CDD GT1 443 508 - -
Bva03g02510 641 ProSiteProfiles Myb-like domain profile. 443 501 IPR001005 -
Bva03g02510 641 Coils Coil 289 316 - -
Bva03g02510 641 PANTHER - 1 626 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 53 70 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 581 595 - -
Bva03g02510 641 Pfam Myb/SANT-like DNA-binding domain 71 157 IPR044822 -
Bva03g02510 641 Pfam Myb/SANT-like DNA-binding domain 443 530 IPR044822 -
Bva03g02510 641 MobiDBLite consensus disorder prediction 259 275 - -
Bva03g02510 641 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 626 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 28 72 - -
Bva03g02510 641 ProSiteProfiles Myb-like domain profile. 71 129 IPR001005 -
Bva03g02510 641 SMART sant 69 131 IPR001005 -
Bva03g02510 641 SMART sant 441 503 IPR001005 -
Bva03g02510 641 CDD GT1 71 136 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 563 641 - -
Bva03g02510 641 MobiDBLite consensus disorder prediction 596 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02510 Bva-Chr3 21149004 21152269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02510 62 568 Trihelix Transcription Factor Family AT1G76880 55.114 7.15e-167 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva03g02510 Myb_DNA-bind_4 3.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02510 - - lang:109354958 666.766