Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02509 ATGGAAGGAAGTTTGTCACAGGGAGGTATTATTCCGGGTGGGGCTTCTTATGGTGGTTTTGATTTGCCAGGGTCAATGCGGGTTCATCATCAAGGGCAGCACCCTCAGTGCATGCACCAACATCAAGCTCCTCCCCGCCAAGAGGCTTCAGTGCATTCCTCAATTCATGAAGGTTTTCCACTTACCATGGGATCCTTGCAGAATTGTGATCAGACCATTTCATTGGCTGATTTTAGCAAGGGAGATAGAAGCAAAAACTCGATGAGTGATGAGGATGAACCAAGCTTAACAGAAGATGGTGTTGATGCTCACAATGAAGTGGGCAGAGGGAAAAAGGGTTCACCTTGGCAGCGTGTGAAGTGGACTGATAAGATGGTGAAGCTTCTCATAACAGCTGTTTCTTATATAGGCGAGGATGGAACTTCTGACTGTGGTGggggaggaagaagaaaatctgTGGTCCTGCAGAAAAAGGGTAAGTGGAAATCTATTTCCAAGGTCATGGCAGAGAGGGGTTATCACGTTTCACCTCAGCAATGTGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAGGCTTAATGATATGCTAGGGAGGGGCACCTCTTGTCAGGTTGTAGAGAACCCTGCACTGTTAGATgtcataaattttctttcagagaaagaaaaggatgatGTTCGGAAAATTTTAAGTTCTAAACACCTGTTCTATGAAGAGATGTGTTCATACCATAATGGTAATAGATTGCATTTACCCCATGACCCAGCTTTGCAACGCTCATTGCAGTTGGCTCTCAGGAATAGAGATGATCATGATAATGATGATGTCAGAAGGTCCCATCATGATGATCATTATGAAGATGATCAAGATGTGGAAACTGATGACCATGAAGACTTTGAAGAGAATTATGCTTCCCATGGGGATAATAGAGGAATGTATGGGGGATTAGGGATATCTACAAAGAAATTGAGACAAGGTCACGGCCATGAAGATGTTACATTTGGAAGTTCTTTAAATTTGCAGGACTACAACAGAAGTAATTATCCTCATGCTCAGATGATTCAATCTGATGCAAATCAAGTTTTACCTGAAAACATGAGAGCAGCTTGGGTACAGAAGAATTTAGAAGAACAGAAGCTACAAATTCAAGTTGAGATGTTGGAGCTGGAGAAACAGAGATTTAAGTGGCAGAGGTTTAGTAAGAAGAAGGACCGGGAGTTGGAAAAGCTGAGGATGGAAAATGAGAGGATGAAGCTTGAAAATGAACGCCTGGCGTTAGAATTGAAACGAAAGGAATGGGGTACCTGTACCAGCTTTAACTA 1325 0.4068 MEGSLSQGGIIPGGASYGGFDLPGSMRVHHQGQHPQCMHQHQAPPRQEASVHSSIHEGFPLTMGSLQNCDQTISLADFSKGDRSKNSMSDEDEPSLTEDGVDAHNEVGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDGTSDCGGGGRRKSVVLQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVINFLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDVRRSHHDDHYEDDQDVETDDHEDFEENYASHGDNRGMYGGLGISTKKLRQGHGHEDVTFGSSLNLQDYNRSNYPHAQMIQSDANQVLPENMRAAWVQKNLEEQKLQIQVEMLELEKQRFKWQRFSKKKDRELEKLRMENERMKLENERLALELKRKEWGTCTSFN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02509 441 PANTHER F16F4.11 PROTEIN-RELATED 1 435 - -
Bva03g02509 441 Coils Coil 373 393 - -
Bva03g02509 441 MobiDBLite consensus disorder prediction 269 313 - -
Bva03g02509 441 MobiDBLite consensus disorder prediction 79 115 - -
Bva03g02509 441 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Bva03g02509 441 MobiDBLite consensus disorder prediction 83 115 - -
Bva03g02509 441 PANTHER FACTOR, PUTATIVE-RELATED 1 435 - -
Bva03g02509 441 Gene3D - 121 193 - -
Bva03g02509 441 Coils Coil 401 433 - -
Bva03g02509 441 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02509 Bva-Chr3 21136538 21138712 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva03g02509 Myb_DNA-bind_4 4.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02509 - - gmx:100812134 686.026