Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02505 atGGGTAGAAAGAAGCCCACTGCACGTGACGAAGAGAATCCGCCTGCACCATCGCAGGGTGGTGGAAAGTCGAAGAAGAAGGCCCTTCTCATTGACGATGATGAATATTCTATTGGAACTGAGCTTTCAGAGGAGCCACCGGCTCAGGAAGAGAAGCCCTCTGTGACTGGGAAGAAGAAAGTGAACAAGGGTAATGCCAAAGCTTCACGAGCAAAAGATGATGATCTagaggaagaggaggaagTACCTGAAGTTGTAATTACTGGGAAGAAGGAGAAATCGAAGGAGGGTGGTGGGAATAGTGTGTTTAGTACATCAAACTTTGGTTTGCTTGGTGATGGGGAGGATGATGACGAAGAGAAGTCAGATGTAACTGGTGAGAAGGATGAGGAAGAGGATGAGCCAGTGGTTAGTTTCACCGGTAAGAAGAAGTCTTCAAAGGCTCCAAAGAAGGGTGGTGGTAGTTTGTTCTCTTCCTCGGCTTTTGATGCCATTGGTGATGATAACGAAGGTGtggttgatgattctttggaaGACAATAGAGGTGATGATGAGGACAATGATGAGCCggttatttcttttactgGAAAGAAGAAATCGTCAAAAGGTGGCAAGAAGAGCGGTGCTCTATTCACAGCTTCTAGTTTTGCTGATATTGATGATGCAGAGGCCAAGAATGAAAAAGCTGAGGATGAAGATGTTGCTGCAATTTCTTTCACtggcaagaaaaagaaatcggCCAAGTCATCAAAGAAAGCAATTAATTCATTTAGTGCGGCTTTTCctgaagaagagaatgatgaTGACGTTTCTGTGCCAGAGTCTGCTATAGCTGGCAATGACAAGGTTGAGGATGAAGATGTTTTATCTGTTGCATTTTCAGGTAAAAAGAAGTCTTCCAAGAAGAAGAGCAGTAGTGCTACTACCAAAACGAGTAATGACATTGAGCTTGCTGATGTTGCTGAAACTGAGCAAGCTAGTGTAGGAATTAGTACTACTGATGTGAACAACAATAAAGTTAGTAAGAGTGAAGAGTTAGTAGAAACTtccaaaaacaagaagaaaaataaaaaaagtggacgaactgatcaagaagaggaagattTGGATAAAATTCTTGCGGAACTTGGTGAAGGGCCTCCTGTAGGAAAACCTGTTACACTTCCACCTCATGATAATAAAGCTGAGGCTCCTCCTGAAGTAATTGCCCCTGCTGGTGCTGCGGGTGAAAAAGAAGGTGAAGAAGAGACCATGGAGTCTGCTGctgcaaagaagaagaaaaagagaaaagaaaaggaaaaggagaagaaggcAGCTGCAGCGGCGGCAGCAGCTGGGAGTGTACCATATGATGAACCCAAATCTGAGATGAttgaaccaaagaaaaatgattcaaAGACTAAAGCAGCTGACAAGAAAGTGCCAAAGCATGTAAGGGAGATGCAAGAGGCACTAGCTAGAAGAAAAGAGgctgaagaaagaaagaaaagggaagaagaggagaagttaaggaaggaagaagaggagCGCCGCAGGCAGGAGGAACTTGAGAGACAAGCGGAAGAGGctagaagaaggaaaaaggaaagagagaaggagaagctccagaagaagaagcaagaagGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGTTTGGAGGCAATGAGGAAGCAGTTTCTTTCTAGTACAGAAGGTGTGACTCTTCCTACTGCGGACTCTGGCGTACCAGCCAAACGACCCATATATCAGACTAAGAAGTCAAAACAAACCCATCGTCAACAGAATGGTGCCGCCATTGTTAAGACAGAAGAAAATGTCGAAGCAAAGGAAAATCAGGAGACCACCACTGGGCTGGATTCTGTGGAACCAGAGAAGGTTGAAGAAGTGGAGTCCATTCAGGTGGAGAACAAAGTTGAACCCTCTGAAGCCGGTGATGAGGATGGTGTGGAAGAGGACGATGAAGAGGATGAATGGGATGCAAAGAGTTGGGATGATGCTGTTGTTAATCTGAATACCAAAAGTGCTTTTGCTGATGAAGAGGCTGACTCTGAGCATGAACTAGCTGTGAAAAAGGAGATTAAAAATGCCATACCTAATCGCACTGCTGCACCTCCAGCTGCTGTCAAATCAACAGCCACTGGTAAGAAAATTGAGGAAGTTGAAGATAAGAAGCAGACTGAGGTTGCGGTTATGggcaaaaataaaaggcaGGATCGTGAATTGAAAAGGGAGCCACCGAAGCCAAGTGAGGAGAATCTTCGATCCCCAATTTGCTGTATCATGGGACATGTCGACACTGGTAAAACAAAGCTGCTGGATTGTATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGTGGTATCACTCAGCAGATTGGTGCAACATACTTTCCTGCTGAGAACATACGTGACAGAACTAAGGAGCTGAAAGCTGATGCAAAGCTGAAAGTTCCAGGTCTACTGGTTATTGATACTCCTGGTCATGAATCTTTTACTAATTTAAGATCTCGGGGCTCAGGATTATGTGATATTGCAATCTTGGTCGTTGACATTATGCATGGCTTAGAGCAACAAACTATAGAATCTCTCAACCTTTTGAAGATGAGGAATACAGAATTCATTGTTGCATTAAATAAGGTTGACAGGCTATATGGATGGAAAGTGTGTCGTAATGCACCAATTGTTAAGGCCTTGAAGCAGCAGTCTAAGGATGTGCAAAATGAGTTCAACATGAGGCTTACTCAGATTGTCACACAATTCAAGGAACAAGGTTTAAACACCGAATTGTACTATAAGAACAGAGAAATGGGAGAAACCTCCAGTATTGTACCAACAAGTGCTATAAGTGGAGAAGGAATACCTGATTTGTTGCTGTTGTTGGTTCAATGGACCCAGAAAACAATGGTTGAGAAACTTACATATAGTGAAGAAGTGGAGTGTACTGTTCTGGAGGTCAAGGTTGTCGAGGGCCATGGTACTACCATTGATGTCGTCTTAGTCAATGGTGTGCTTCACGAGGGAGATCAAATAGTTGTTTGTGGAATGCAGGGGCCAATTGTTACCACAATTCGAGCATTACTGACACCTCATCCAATGAAGGAGCTCCGTGTTAAGGGAACATATGTGCATCACAAGGAAATAAAGGCTGCGATGGGTATAAAAATTACTGCTCAGGGGCTTGAACACGCTATTGCTGGTACTGGTTTGTATGTGGTGAGGCCTGAGGATGATCTAGAAGATATTAAAGAAGCAGCCATGGAAGATATGAATTCAGTTATGAGCAGGATTGACAAGACTGGTGAGGGTGTTTGTGTACAGGCATCAACCCTTGGTTCATTGGAAGCATTGTTGGAGTTTTTGAAAACGCCAGAAGTGAGTATTCCTGTTAGTGGTATCAGCATTGGTCCAGTCCATAAAAAAGATGTGATGAAGGCCAGCGTGATgcttgaaaagaagaaagagtatGCTACTATTTTGGCATTTGATGTGAAAGTCACTCCTGAGGCCCGGGAACTTGCAGATGAACTGGGTGTCAAGATTTTCATTGCTGATATCATTTACCACCTATTCGACCAGTTTAAGGCTTACATTGAGAGCATTaaggaggaaaagaagagGGAATCAGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAGATATTACCAAACTGCATTTTCAACAAGAAGGATCCTATTGTTTTGGGAGTCGATATTATTCAAGGCATTCTTAGGGTTGGCACTCCAATTTGTATCCCTTCTAGAGAGTTCATTGACATTGGTCGCATTGCGTCCATCGAGAACAATTACAGACCTGTTGATTATGCCAAGAAAGGGCAGCAAGTGGCTATCAAGATTGTTGGGAGCAATCCGGAGGAACAACAAAAGATGTTTGGAAGGCATTTTGAGATTGAAGATGAACTTGTAAGCCATATATCAAGGAGATCTATTGATGTGCTGAAAGCTAACTACCGAGATGATCTGAGCACTGAAGAATGGAGGCTGgttgtaaaattgaaaaatatcttCAAGATACCTTG 4049 0.3944 MGRKKPTARDEENPPAPSQGGGKSKKKALLIDDDEYSIGTELSEEPPAQEEKPSVTGKKKVNKGNAKASRAKDDDLEEEEEVPEVVITGKKEKSKEGGGNSVFSTSNFGLLGDGEDDDEEKSDVTGEKDEEEDEPVVSFTGKKKSSKAPKKGGGSLFSSSAFDAIGDDNEGVVDDSLEDNRGDDEDNDEPVISFTGKKKSSKGGKKSGALFTASSFADIDDAEAKNEKAEDEDVAAISFTGKKKKSAKSSKKAINSFSAAFPEEENDDDVSVPESAIAGNDKVEDEDVLSVAFSGKKKSSKKKSSSATTKTSNDIELADVAETEQASVGISTTDVNNNKVSKSEELVETSKNKKKNKKSGRTDQEEEDLDKILAELGEGPPVGKPVTLPPHDNKAEAPPEVIAPAGAAGEKEGEEETMESAAAKKKKKRKEKEKEKKAAAAAAAAGSVPYDEPKSEMIEPKKNDSKTKAADKKVPKHVREMQEALARRKEAEERKKREEEEKLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLSSTEGVTLPTADSGVPAKRPIYQTKKSKQTHRQQNGAAIVKTEENVEAKENQETTTGLDSVEPEKVEEVESIQVENKVEPSEAGDEDGVEEDDEEDEWDAKSWDDAVVNLNTKSAFADEEADSEHELAVKKEIKNAIPNRTAAPPAAVKSTATGKKIEEVEDKKQTEVAVMGKNKRQDRELKREPPKPSEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRDRTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKVCRNAPIVKALKQQSKDVQNEFNMRLTQIVTQFKEQGLNTELYYKNREMGETSSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSEEVECTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYVHHKEIKAAMGIKITAQGLEHAIAGTGLYVVRPEDDLEDIKEAAMEDMNSVMSRIDKTGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIESIKEEKKRESADEAVFPCVLKILPNCIFNKKDPIVLGVDIIQGILRVGTPICIPSREFIDIGRIASIENNYRPVDYAKKGQQVAIKIVGSNPEEQQKMFGRHFEIEDELVSHISRRSIDVLKANYRDDLSTEEWRLVVKLKNIFKIP 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02505 1349 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1348 - -
Bva03g02505 1349 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1348 IPR015760 -
Bva03g02505 1349 Gene3D - 1101 1205 IPR036925 -
Bva03g02505 1349 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 757 973 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 MobiDBLite consensus disorder prediction 325 343 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 112 134 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 705 758 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 344 368 - -
Bva03g02505 1349 Pfam Translation-initiation factor 2 1086 1198 IPR023115 -
Bva03g02505 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 758 1048 IPR027417 -
Bva03g02505 1349 SUPERFAMILY Translation proteins 1216 1348 IPR009000 -
Bva03g02505 1349 Pfam Elongation factor Tu GTP binding domain 761 969 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 Gene3D Translation factors 980 1100 - -
Bva03g02505 1349 Pfam Elongation factor Tu domain 2 996 1071 IPR004161 GO:0005525
Bva03g02505 1349 MobiDBLite consensus disorder prediction 168 186 - -
Bva03g02505 1349 Coils Coil 411 443 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 409 426 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 454 561 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 1 208 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 718 754 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 258 665 - -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 624 647 - -
Bva03g02505 1349 CDD IF2_eIF5B 760 970 - -
Bva03g02505 1349 Gene3D - 751 979 IPR027417 -
Bva03g02505 1349 MobiDBLite consensus disorder prediction 83 97 - -
Bva03g02505 1349 TIGRFAM small_GTP: small GTP-binding protein domain 762 886 IPR005225 GO:0005525
Bva03g02505 1349 MobiDBLite consensus disorder prediction 648 665 - -
Bva03g02505 1349 Gene3D Translation factors 1212 1348 - -
Bva03g02505 1349 CDD aeIF5B_II 981 1091 - -
Bva03g02505 1349 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1082 1211 IPR036925 -
Bva03g02505 1349 PRINTS GTP-binding elongation factor signature 841 852 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 PRINTS GTP-binding elongation factor signature 761 774 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 PRINTS GTP-binding elongation factor signature 825 835 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 PRINTS GTP-binding elongation factor signature 877 886 IPR000795 GO:0003924|GO:0005525
Bva03g02505 1349 CDD IF2_aeIF5B_IV 1220 1315 - -
Bva03g02505 1349 Coils Coil 474 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02505 Bva-Chr3 21114036 21123987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02505 187 1348 Eukaryotic Initiation Factors Gene Family AT1G76810 66.807 0.0 1245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02505 K03243 - gmx:100814875 1644.02