Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02490 aTGATGAGGGGATTTTTGAGTATGTTCTGTGGTGAATCCGGTTGTCCAGACAGTGAGGGAATGCGTTGCGGTTTTGATATCAAACTCTGGAGAGATCCTTCTACATggacaaaaatattcaaagttGCAGCTAGTTTCAGCTATAGCCAATGGATCTCTTGGCTTGTTGCATTTGTGTTTAGGCATTTGGGTTTTAGAGGAGAAGTTGAGGCAAACCCACAGTGCTCTTCCTCTCAGTTATTGGTTGCTAGAATTCTTTCAGGGCTTGACTTGGTTGTTGGTGGGTTTAACAGCAAGTCTTCAACTGAGGCAGTTTCCAAGAGCATGGTTGAGGTAGCTTTAGATGTTGTATCATTTCCAGGAGCAATTTTATTGCTCTTGTGCGTATATAAGGGACATAAGCATGAGGACACTGAGAGAGAGATCGATGAAAGCCTTTATACCCCTTTAAATGGTGAGTCCAATGGCATTGATAAAACTAGTTCTGTTGAATGTGTAACACCATTTGCCAAAGCTGGATTCTTCAATAAGATGACGTTTTGGTGGTTGAATCCATTGATGAAAACTGGTAAGGAGAAAACACTTCAAGATGAAGATATCCCGAAGTTGGGCGAGGCAGAACGAGCAGAAAGctgttatttgttttttctggaCAAACTGAacaaacagaaacagaaagaacCATCATTGCAGCCTTCTGTTTTAAAGACAATAATTTTGTGCCATTGGAGAGACATTCTGATATCTGGTTTCTTTGCATTGCTAAAGGTACTCACCATTTCTTCTGGTCCTCTACTTCTGAATGCCTTTATATTGGTTGCACAGGGTAAAGCgagttttaaatatgaagGTTATGTATTGGCCATATCACTTTTCTTTGTAAAGTTCCTGGAATCGTTATCACAAAGGCAGTGGTACTTCCGTAGCAGACTCATTGGTCTGAAAGTTAGGTCCTTGCTTACTGCTGCTATCTATAAGAAGCAACTGAGATTATCCAATGCTTCTAGGTTGGTACACTCTGGTGGTGAGATAATGAATTATGTGACTGTAGATGCCTATAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACTTGGACAACAAGCGTTCAACTATGTATTGCTTTAGTAGTTCTTTTCCAAGCTGTTGGGCTAGCCACAATAGCTTCCTTGGTGGTCATAGTTATCACTGTGCTTTGCAATACTCCACTTGCTAAGTTACAGCATAAGTTTCAGAGCAAACTCATGGTGGCACAAGATGAGAGATTGAGGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTGAAGTTATATGCATGGGAAACCCATTTTAAGAATGCTATAGAAGCCTTAAGAACAGAGGAGCTAAAATGGTTATCAGCAGTGCAATTGCGGAAGGCATAcaattcatttctcttttggtCTTCTCCTGTTTTGGTCTCTGCTGCTACCTTTGGGGCTTGTTATTTCCTCAACATTCCTTTATATGCAAATAACGTTTTTACCTTTGTGGCAACTTTACGCCTTGTTCAAGATCCAATCAGAACCATACCGGATGTTATAGGCGTTGTCATTCAAGCAAAAGTAGCATTTGCACGCATTGTGAAATTCCTCGAGGCACCGGAGCTGCAGAATAGAAATGTCTGGAAGAAATGCTTTAATGATAGTCTGAATGGCTCAATTTTGATCAAGTTTGCTACCTTTTCATGGGAAGATCATGAATCAAAGCCCACACtgagaaacataaatttagaGGTTAAACCTGGACAAAAAGTGGCTATTTGTGGTGAAGTTGGTTCAGGAAAGTCAACCCTCTTAGCAGCAATTCTTGGAGAAGTTCCTCCTAATGAGGGAACTATTGAAGTTTATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTAGTATACGGGATAATATACTGTTTGGATCAGCTATGGATGCTAAAAGATATCAAGAAACACTCGAGAGGTCTTCATTAGTGAAGGATCTTGAGTTGTTTCCCCATGGCGATCTCACGGAAATAGGGGAGAGAGGAGTTAACCTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGCGCTCTTTATCAAAATGCTGACATATATCTGTTGGATGATCCCTTTAGTGCTGTTGATGCACATACTGCCacaaatttgtttaatGAATATGTCATGGAAGGACTTAGAGGGAAGACAGTATTACTTGTGACTCACCAAGTTGACTTCCTTCCTGCATTTGactccattttgTTAATGTCTGATGGGGAAATCCTGCAAGCAGCTCCTTATCATCATCTATTGTCCTCAAGCCAAGAATTTCAGGACCTTGTCAGTGCTCACAAGGAGACTGCTGGTACTGAAAGGCTTGCAGATGTTACTTCTGCACAGAAACACTTAAATTCTGCAAGAGAGATTAGAAAAGCTTATATAGAGAAGCAGTTTGAACCATTGAAAGGCGATCAATTaatcaagaaagaagagagagaagaaggagACACTGGGCTGAAGCCTTACTTACAGTATTTGAATCAGAACAAAGGTTATATATACTTCTTTGTTGCTGCCCTTTCTCACCTGACATTCGTGATCGGTCAGATATCACAGAACTCATGGATGGCTGCTAATGTTGATGATCCTCATATCAACACATTGAAATTAATCCTAGTATACTTGTTGATTGGAGTTATTTCAACTCTCTTCTTGTTGATCAGAAGTCTTGCTACAGTTACTCTGGGTGTTCAATCATCAAAATCTTTGTTCTTACAGTTATTGAACTCTCTTTTTCGTTCTCCAATGTCTTTCTATGATTCCACCCCTTTGGGAAGGATTCTTAGTAGGGTCTCGGCAGATCTAAGCATTGTCGACCTTGATATCCCATTCAGCCTTATTTTTGCCATGGGAGCCACAATGAATTGTTATGCTAATCTTACAGTTTTAGCAGTTATTACCTGGCAAGTGTTGTTTGTGTCCATACCAATGGTTTACGTTGCAATTCACTTGCAGaAATATTACTTTGCCTCTGCAAAAGAATTTATGCGGATGAATGGCACCACAAAATCCTTTGTAGCTAATCATCTAGCTGAATCTGTTGCTGGAGCTGTGACAATAAGGGCTTTTGAGGAGGAAGAACGGTTTTTTATAAAGAATCTTGACCTCATTGATGTCAATGCTAGTCCTTTCTTCCATAGTTTTGCAGCAAATGAATGGTTGATTCAACGGTTAGAAACACTCAGTGCAGTTGTTCTTGCTTCTGCAGCATTTTGCATGGTTGTGCTTCCACCTGGGACTTTCTCCTCTGGATTTATTGGCATGGCTCTCTCTTATGGACTTTCATTAAATGCGTCCCTTGTGTTTTCAATTCAAAACCAGTGCACCATagcaaattatataatatcagTTGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCCAGACGTCATAGAAGGAAATCGTCCTCCTGTGAATTGGCCAGCTGTGGGCAAAGTAGAGATAAATCATCTGCAGATACGATACCGGCCTGGTGCACCTCTTGTACTTCGTGGCATCACATGCACATTCGAAGGAGGGTACAAGATTGGTATTGTTGGCAGGACAGGCAGTGGGAAATCCACTCTGATAGGTGCTTTATTCCGACTCGTGGAGCCAGCGGGCGGAAAGATTATAGTTGATGGCATAGACATCTGTTCTATTGGACTACATGATTTGAGGTCACGTTTTGGTGTTATACCTCAAGATCCTACTCTCTTTAATGGGACAGTCAGATATAATTTGGATCCTTTGTCTCAACATTCTGATGAGGAGATATGGGAGGTTCTTGGGAAGTGCCAGTTGCGTGAGACTgtccaagagaaagaaaagggctTAGACTCCTCAGTTGTGGAGGATGGATCAAACTGGAGCATGGGACAACGGCAGCTATTCTGCTTGGGGCGCGCGCTTTTGAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGAACTGAGTTTGCAGATTGTACTGTCATCACAGTTGCTCATAGAATACCAACCGTGATGGATTGCACTAGGGTTCTCGCCATCAGTGATGGAAAACTGGTGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCATTGTTTGGGCAGCTGGTCAAGGAGTACTGGTCACATTTTCAGTCTGCAGAATCGCATTG 4253 0.3985 MMRGFLSMFCGESGCPDSEGMRCGFDIKLWRDPSTWTKIFKVAASFSYSQWISWLVAFVFRHLGFRGEVEANPQCSSSQLLVARILSGLDLVVGGFNSKSSTEAVSKSMVEVALDVVSFPGAILLLLCVYKGHKHEDTEREIDESLYTPLNGESNGIDKTSSVECVTPFAKAGFFNKMTFWWLNPLMKTGKEKTLQDEDIPKLGEAERAESCYLFFLDKLNKQKQKEPSLQPSVLKTIILCHWRDILISGFFALLKVLTISSGPLLLNAFILVAQGKASFKYEGYVLAISLFFVKFLESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQLRLSNASRLVHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSVQLCIALVVLFQAVGLATIASLVVIVITVLCNTPLAKLQHKFQSKLMVAQDERLRASSEALVNMKVLKLYAWETHFKNAIEALRTEELKWLSAVQLRKAYNSFLFWSSPVLVSAATFGACYFLNIPLYANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLEAPELQNRNVWKKCFNDSLNGSILIKFATFSWEDHESKPTLRNINLEVKPGQKVAICGEVGSGKSTLLAAILGEVPPNEGTIEVYGKFAYVSQTAWIQTGSIRDNILFGSAMDAKRYQETLERSSLVKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMEGLRGKTVLLVTHQVDFLPAFDSILLMSDGEILQAAPYHHLLSSSQEFQDLVSAHKETAGTERLADVTSAQKHLNSAREIRKAYIEKQFEPLKGDQLIKKEEREEGDTGLKPYLQYLNQNKGYIYFFVAALSHLTFVIGQISQNSWMAANVDDPHINTLKLILVYLLIGVISTLFLLIRSLATVTLGVQSSKSLFLQLLNSLFRSPMSFYDSTPLGRILSRVSADLSIVDLDIPFSLIFAMGATMNCYANLTVLAVITWQVLFVSIPMVYVAIHLQKYYFASAKEFMRMNGTTKSFVANHLAESVAGAVTIRAFEEEERFFIKNLDLIDVNASPFFHSFAANEWLIQRLETLSAVVLASAAFCMVVLPPGTFSSGFIGMALSYGLSLNASLVFSIQNQCTIANYIISVERLNQYMHIPSEAPDVIEGNRPPVNWPAVGKVEINHLQIRYRPGAPLVLRGITCTFEGGYKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLRETVQEKEKGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTRVLAISDGKLVEYDEPMNLMKREGSLFGQLVKEYWSHFQSAESH 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02490 1417 CDD ABCC_MRP_domain2 1169 1389 - -
Bva03g02490 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1173 1405 IPR003439 GO:0005524
Bva03g02490 1417 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 96 1417 - -
Bva03g02490 1417 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 96 1417 - -
Bva03g02490 1417 CDD ABCC_MRP_domain1 562 762 - -
Bva03g02490 1417 Pfam ABC transporter transmembrane region 247 509 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02490 1417 Pfam ABC transporter transmembrane region 855 1098 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02490 1417 SUPERFAMILY ABC transporter transmembrane region 235 540 IPR036640 GO:0005524|GO:0016021
Bva03g02490 1417 ProSitePatterns ABC transporters family signature. 687 701 IPR017871 GO:0005524
Bva03g02490 1417 SMART AAA_5 589 762 IPR003593 -
Bva03g02490 1417 SMART AAA_5 1197 1389 IPR003593 -
Bva03g02490 1417 CDD ABC_6TM_ABCC_D1 248 535 IPR044746 GO:0140359
Bva03g02490 1417 Gene3D ABC transporter type 1, transmembrane domain 821 1152 IPR036640 GO:0005524|GO:0016021
Bva03g02490 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1161 1398 IPR027417 -
Bva03g02490 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 247 527 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02490 1417 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 564 785 IPR003439 GO:0005524
Bva03g02490 1417 Pfam ABC transporter 1188 1336 IPR003439 GO:0005524
Bva03g02490 1417 Gene3D - 539 809 IPR027417 -
Bva03g02490 1417 SUPERFAMILY ABC transporter transmembrane region 857 1153 IPR036640 GO:0005524|GO:0016021
Bva03g02490 1417 CDD ABC_6TM_ABCC_D2 853 1146 IPR044726 GO:0140359
Bva03g02490 1417 Pfam ABC transporter 580 714 IPR003439 GO:0005524
Bva03g02490 1417 Gene3D - 1155 1406 IPR027417 -
Bva03g02490 1417 Gene3D ABC transporter type 1, transmembrane domain 235 538 IPR036640 GO:0005524|GO:0016021
Bva03g02490 1417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 784 IPR027417 -
Bva03g02490 1417 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 865 1134 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02490 Bva-Chr3 21012571 21019742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02490 556 809 Calmodulin-binding Proteins AT2G36910 30.037 9.65e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02490 K05666 - gmx:100811468 2234.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02490 03 21012571 21019742 Bva03g02490 03 21012571 21019742 ECH