Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02484 ATGGCTAgttcttctagtttctcttCTTATGCTTCTTGGGTCTTGATTACAACGGTTCTTGCTGGTCTTAGTGGGTGCACTTCGAGCCAGATTGGTTTGGGGTCAAGATTGTTGGCCAGTAAAGGCGAAAGATGGATTTCTAATAATGGTACATTTGCGTTTGGATTTTCACCAGCAGATTCTGCTGATAGTTTGCTTCGGCTGGGTATTTGGTTTGCAGAGCTTCCGGGAGATCCAACTCTGGTTTGGTCAGCTAACAGAGAATCTTTGGTATCAAAAAATGCAATCTTGGAGCTTGACACCACTGGAAACCTTGTTCTCAAGGATGGAGACATCACCATCTGGACATCAAACACCTCTGGAGCTGGTGTAGAAGCAGCAGTCATGGCAGAATCCGGCAACTTCATCCTCCACAACATCAACAACCACTCTGTGTGGCAGAGCTTTTCACAACCATCTGATACCCTCTTACCAAACCAACCTCTAACAGTCTCTTCAGAATTGACATCTTCAAAATCTCCCTCTCATGGTGGCTACTATGCTCTCAAAATGCTTCAGCAGCCTACTTCATTAAGCCTTGCCCTCACTTACAATCTTCCAGAATCTTATGCAACTTCACCTGAATCATATGTCAACTATTCCTACTGGCAAGGCCCTGATATCTCCAATGTAACAGGAGAAGTTATGGCAGTTTTAGACCAAGCAGGAAGCTTTGGaattgtgtatggtgattcCTCAGATGGGGCAGTTTATCTGTACAAGAATGATAATGATGATGCAGGTTTATCTTTTTCAGTTCGCCAACCTACTCCATTATCTGTTCTTAGAAGATTGATTCTGGAAAAGAATGGAAATTTGCGTTTGTACCGTTGGGATAATGATGTAAATGGGTCAAGTCAGTGGGTGTCTGAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAATTTGTGGTAATGGGATTTGTAATTTGGATAGAAGCAAGACTAATGCTTCTTGTACTTGCTTGCCCGGGacttccaaagttgacaaagatGGCCATTGCTATGAGAACTCATCATTGGTGGGAAAATGCAATTCGCGGCATGAAAACCAGACATCCCAATTTCGGATTTCAGTAGTGCAGCAAACAAATTACTACTTTTCTGATTTATCAGTTATAGCAAATTACAGTGATATAGCTACTGTATCAAAATGTGGGGATGCCTGCTTATCAGATTGTGATTGTGTTGCTTCTGTTTATGGGCTAAATCAGGAGAAACCATACTGCTGGGTTTTAAATAGCTTGAATTTTGGTGGGTTTGAGGACACTAGCTCAACCATTTTTGTGAAGGTGAAGTCAAATGGGATAATCACACCAGAAGGTGAAGAAGGAGGGTCTAGTGGCTCATCTAGTACCAAAAAGAAGGTTGTGGTTCTTCCTCTCGTTCTGAGCATGTTACTTCTTATAGCTCTTATGTGTTTACTGCTCTACTACAGTGTTCATAGAAAAAGAACCTTGAGAAGGGAAATGGAAAATTCCTTGATCTTATCAGGTGCTCCAATGAAATTCACCTACCGTGATTTACAAATCAGGACATCTAATTTTTCACAGCTTTTAGGCACAGGTGGATTTGGGAGTGTATACAAGGGAAGCCTTGGGGATGGCACACTAGTGGCAGTAAAGAAACTTGATAGGGTTTTGCCTCATGGAGAGAAGGAATTTATCACTGAAGTAAACACCATTGGCTCAATGCATCATATGAACTTAGTTCGCTTATGTGGGTACTGCTCTGAGCGATCACACCGGCTTCTAGTTTATGAGTTCATGAAAAATGGGTCTTTGGATAAATggatttttccttcaaatcaAGGAGGCGAGAAGCTATTAGATTGGCCAACCCGCTTCGACATAGCTATAGCTACTGCACAAGGAATAGCATACTTTCATGAGCAGTGCAGAAATCGGATAATACATTGTGATATCAAACCGGAAAACATACTGTTAGATGAGAATTTTTGTCCTAAGGTGTCTGATTTTGGTCTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTTATGACAATGATCAGAGGGACTAGAGGTTATCTTGCTCCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCTGATGTCTACAGCTATGGCATGTTGCTTTTAGAGATCATTGGCGGCCGGAGAAATCTTGATATGTCCTTTGATGCAGAGGACTTCTTCTATCCTAGTTGGGCTTTCAAGGCAATGACTAAAGGGTCACCATTGAAAACAGCAGATAGACGATTAAACGGGGCAGTTGATGAAGAAGAGCTAACAAGAGCTCTGAAAGTGGCCTTTTGGTGCATTCAAGATGAGGTTATCCTGAGGCCAACAATGGGGGAAGTGGTGAGGATGCTGGAAGGGACCGTCAACATTAATGCTCCACCAATGCCACAAACAGTGCTAGAGTTAATCGAGGAAGGTTTAGAACATGCATACAGAGCTATGAAAAGAGATTACAATCAGGGCAGCTCATTCACCATGACTAGCCACCCTTCATCTCTTGCTACATGTAGCCACTCCACAATGTCACCCAGATA 2582 0.4148 MASSSSFSSYASWVLITTVLAGLSGCTSSQIGLGSRLLASKGERWISNNGTFAFGFSPADSADSLLRLGIWFAELPGDPTLVWSANRESLVSKNAILELDTTGNLVLKDGDITIWTSNTSGAGVEAAVMAESGNFILHNINNHSVWQSFSQPSDTLLPNQPLTVSSELTSSKSPSHGGYYALKMLQQPTSLSLALTYNLPESYATSPESYVNYSYWQGPDISNVTGEVMAVLDQAGSFGIVYGDSSDGAVYLYKNDNDDAGLSFSVRQPTPLSVLRRLILEKNGNLRLYRWDNDVNGSSQWVSEWAAVSNPCDIAGICGNGICNLDRSKTNASCTCLPGTSKVDKDGHCYENSSLVGKCNSRHENQTSQFRISVVQQTNYYFSDLSVIANYSDIATVSKCGDACLSDCDCVASVYGLNQEKPYCWVLNSLNFGGFEDTSSTIFVKVKSNGIITPEGEEGGSSGSSSTKKKVVVLPLVLSMLLLIALMCLLLYYSVHRKRTLRREMENSLILSGAPMKFTYRDLQIRTSNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSERSHRLLVYEFMKNGSLDKWIFPSNQGGEKLLDWPTRFDIAIATAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVMTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFDAEDFFYPSWAFKAMTKGSPLKTADRRLNGAVDEEELTRALKVAFWCIQDEVILRPTMGEVVRMLEGTVNINAPPMPQTVLELIEEGLEHAYRAMKRDYNQGSSFTMTSHPSSLATCSHSTMSPR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02484 860 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 11 860 - -
Bva03g02484 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Bva03g02484 860 PIRSF SRK 3 851 IPR024171 GO:0004674
Bva03g02484 860 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Bva03g02484 860 SUPERFAMILY Protein kinase-like (PK-like) 507 801 IPR011009 -
Bva03g02484 860 MobiDBLite consensus disorder prediction 838 860 - -
Bva03g02484 860 CDD B_lectin 40 152 IPR001480 -
Bva03g02484 860 Pfam Protein kinase domain 531 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02484 860 Gene3D Transferase(Phosphotransferase) domain 1 604 809 - -
Bva03g02484 860 Pfam D-mannose binding lectin 80 167 IPR001480 -
Bva03g02484 860 ProSiteProfiles Protein kinase domain profile. 528 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva03g02484 860 Gene3D Phosphorylase Kinase; domain 1 492 603 - -
Bva03g02484 860 CDD STKc_IRAK 534 802 - -
Bva03g02484 860 SMART blect_4 36 152 IPR001480 -
Bva03g02484 860 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 293 IPR036426 -
Bva03g02484 860 PANTHER OS07G0415500 PROTEIN 11 860 - -
Bva03g02484 860 Pfam S-locus glycoprotein domain 254 339 IPR000858 GO:0048544
Bva03g02484 860 Gene3D - 29 151 IPR036426 -
Bva03g02484 860 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Bva03g02484 860 SMART serkin_6 528 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02484 Bva-Chr3 20988191 20991783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02484 482 810 Receptor kinase-like Gene Family AT5G20050 44.101 2.65e-83 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva03g02484 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02484 - - gmx:100794281 1386.7