Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02478 ATGGTATCGGATACACTTAGGCGAATTGTGGCACCCTGTTGGAGACCATCTGTTGTGAATGATGGTGAAAATTCCAGTAAGAATGGTGATGCAAATGGTCGTAGTGATGGTTTGTTTTGGTACAAAGATGCCGGAAAACACCTCGGTGGCGAGTTCTCAATGGCAGTTATTCAAGCAAACAATTTGTTGGAGGATCAAAGCCAACTTGAATCAGGCCCCATGAGCTCTCTTGAATCAGGTCCTCAAGGAACATTTGTTGGTATATATGATGGACATGGAGGTCCTGAAGCTGCACGTTTTGTCAATAGCCACTTATTTAACAATATCAAGAaaTTCACTTCAGAGAATCAAAGAATGTCATCCGATGTTATCAAGAAAGCATTTCTGACAACAGAAgatgaatttctttctctagtAAGGAAGAAGTGGCAGAGCAAACCACAGTTAGCTTCTGTTGGATCATGCTGTTTGACAGGCCTAATATGTAATGGGCTGCTCTATATTGCTAATGCTGGAGATTCTCGGGTGGTGTTAGGTAAACTGGATAAGACTTCAAAAGATATTAAAGCAGTTCAATTATCTTATGAGCACAATGCTAGCTTTGAATCAGTGAGAGAGGAGTTGCAGGCACTGCATCCTAATGATCCCCAGATTGTGGTCATGAAGCACAAGGTCTGGCGTGTGAAGGGTCTGATTCAGGTTTCAAGATCCATTGGAGATGCCTATCTAAAGAAGGCAGAATTTAACAGAGAACCTCTTTTGCCAAAATTTAGGCTCCCACAACCTTTTGAGAAGCCAATCCTTCTAGCTGAACCAACAATATCAGTACACAAAATTTGTCTTGAAAATCAGTTTCTTATATTCGCATCAGATGGGTTATGGGAGCACTTGAGCAATCAGGAAGTAGTTGAGATGATCCATAGCTGTCCGCGTTATGGAATTGCGAGGAAACTTATCAAAGCTGCACTGTGTGAAGCagcaaagaagagagaaatgagaTACTCGGACCTGAAAAAGATTGATCGAGGTGTGAGAAGACATTTCCACGATGATATATCTGTTATAGTATTGTATCTTGATTCCTATCGATTCAGCCGCAGCAGTTCCCGCAGTGGGCCATTACTCTCTGTTAGAGGAGGTTCTTCTGTTGATGATATTGGCATTGCTATTGGAGGAGATAAGCAGTTGATGAGGTTCTA 1199 0.4053 MVSDTLRRIVAPCWRPSVVNDGENSSKNGDANGRSDGLFWYKDAGKHLGGEFSMAVIQANNLLEDQSQLESGPMSSLESGPQGTFVGIYDGHGGPEAARFVNSHLFNNIKKFTSENQRMSSDVIKKAFLTTEDEFLSLVRKKWQSKPQLASVGSCCLTGLICNGLLYIANAGDSRVVLGKLDKTSKDIKAVQLSYEHNASFESVREELQALHPNDPQIVVMKHKVWRVKGLIQVSRSIGDAYLKKAEFNREPLLPKFRLPQPFEKPILLAEPTISVHKICLENQFLIFASDGLWEHLSNQEVVEMIHSCPRYGIARKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVLYLDSYRFSRSSSRSGPLLSVRGGSSVDDIGIAIGGDKQLMRF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02478 399 SMART PP2C_4 45 357 IPR001932 -
Bva03g02478 399 PANTHER ALPHABET, ISOFORM E-RELATED 8 382 - -
Bva03g02478 399 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 382 - -
Bva03g02478 399 ProSiteProfiles PPM-type phosphatase domain profile. 51 359 IPR001932 -
Bva03g02478 399 Pfam Protein phosphatase 2C 73 324 IPR001932 -
Bva03g02478 399 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Bva03g02478 399 CDD PP2Cc 52 359 IPR001932 -
Bva03g02478 399 Gene3D - 41 366 IPR036457 -
Bva03g02478 399 SUPERFAMILY PP2C-like 80 361 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02478 Bva-Chr3 20936457 20939720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02478 3 380 PP2C-type Phosphatase Gene Family AT3G12620 75.989 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02478 K01102 - pop:7469783 594.349