Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02475 ATGGAAGTCACTAGCACCCATAACGGCAGTAGTAGCATGATGTGGTTTTTTAAGGATAGAGGTTTTGATGATAAAAGCATACAAGGCATGTTCAGGAGGTGCAGGCGCCTCGAGGGTGCTCGTCAGGAAAGGGCAAATGAGAACTGGGCTTATTTGAAAAGCATTGGCATTCAAGAGAGGAAACTCCCTTCTATTATCTCAAAATGCCCCAAGATTCTCTTGCTTGGTCTTAATGAGAAGATTGTGCCCATGGTTCAGTGTCTTATGACACTTGGAACAAAACCCCATGAAGTTGCTTCAGCCATAGCCAAGTTTCCTCACATACTCTCACATAGTGTGGAAGAGAAGCTTTGCCCCCTTTTGGCCTTCTTTCAGGCATTGGGCATTCCTGAAAAGCAACTTGGGAAAATGATATTGCTCAACCCGAGGCTTGTAAGTTACAGCATTGAAATAAAGCTGGCAGAACTTGTGGATTTCCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATTGGAAAAGTTTTAGCGAGGGACCCCTTCATTATGGGTTATAGCGTTGATAAAAGGCTACGCCCTACTTCAGAGTTTTTGAAGTCAATAGGTCTGACTGAGCCTGATCTTCAAGTAGTGGCAGTAAACTTCCCTGAAGTTCTGACTAGAGACGTGAACAAAGTTTTGGTACCAAACTATGCTTATTTGAGGAGATGTGGATTTCATGACCAACAGATTGTTTCTTTGGTGGTTGGTTATCCTCCAATCCTGATCAAGAGCATCCAGAATTCGTTAGAACCCAGGATCAGGTTTTTGGTAGATGTAATGGGAAGACAAATTGATGAAGTTGTTGATTGTCCTTGCTTCTTTCGTCATGGCTTGAAGAAAACATTGGAGGTGCGGTATAAACTTCTACAGAAGAGGAACTTAAATTGTAGCCTTAGTGAAATGCTGGAATGTAATAAGAAGAAGTTCTTCATGAAGTTTGGTTTATTTGAAGGGTATGCCTTGAGTAACTA 1010 0.4188 MEVTSTHNGSSSMMWFFKDRGFDDKSIQGMFRRCRRLEGARQERANENWAYLKSIGIQERKLPSIISKCPKILLLGLNEKIVPMVQCLMTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQLGKMILLNPRLVSYSIEIKLAELVDFLASLGLNKDGMIGKVLARDPFIMGYSVDKRLRPTSEFLKSIGLTEPDLQVVAVNFPEVLTRDVNKVLVPNYAYLRRCGFHDQQIVSLVVGYPPILIKSIQNSLEPRIRFLVDVMGRQIDEVVDCPCFFRHGLKKTLEVRYKLLQKRNLNCSLSEMLECNKKKFFMKFGLFEGYALSN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02475 336 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 12 328 - -
Bva03g02475 336 Pfam mTERF 112 322 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 Pfam mTERF 16 116 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 Gene3D Transcription termination factor 3, mitochondrial 82 331 IPR038538 -
Bva03g02475 336 PANTHER CGI-12 PROTEIN-RELATED 12 328 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 244 276 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Bva03g02475 336 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva03g02475 mTERF 7.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02475 K15032 - gmx:100816929 561.607