Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02458 ATGCCTTTCTTTCAAACTACAACAGGAGAATTCTCATGGGCTTGTCTGTCAGATTTCCATTTCACTTCTTTCTGCACTCAAAGGAGCATAATAAACATTGTTAATCTGCTTTTCCTCAGTGTTTTCTACATGTCTTTGCTTGTCAGATTGATCAGCAGAAATACATCTACTGAGAGCCAAAGAAAGGGATGGCTTTCCACAGTTGTGTCAATTTGTTGTGCTCTTGTTAGCATTCTTTATTTTACCTATGGATTGTGGAATCTCATAGCTAAAAGAGATGACATAGAGCAGTCAAGCTGGTTAGTTTGCATGATCAAAGGACTGATTTGGATTTCTTTGACAGCTTCTTTGCTTGTTCAGAGACCCAAATGGATAAGAATTCTAAACTCTCTTTGGTgggcattttcttttatatttgtttcatcTATTAATTTAGAAACTCTGTTCAAAGATCATAGAATCCAACTATTTGATATAATCCAGTGGCCTATACACTTTTTACTTCTTCTCTGTGCCTTACAAAGCTATGGTTACTTTGTTTCAAAACAAACCCCAAATGGCAGTTTATCTGAGCCTCTATTAGACCAGAAGgttgaaaataaacaatcaaGACTAGGCCAAGCCTCATTTCTTAGCAAACTAACTTTCTCTTGGATTAATCCCTTACTGAGTTTGGGTTACTTAAAGCCATTATCTCTTGAAGACATCCCTTCTCTTGTTTCTGAAGATGAAGCCAACTTAGCTTACCAAAAGTTTTCCCATTCATGGAATTTGCTTTCTAGGGAGAGATGTACCAAAAACTTAGTTCTTTGGTCCTTAATTAGAGTGCACTGGAAGGAGAACGTATTCATAGCAATTTGTGCATTTCTAAGGACAATTTCTGTTGTAGCTTCTCCTCTGCTTCTTTATGCTTTTGTAAACTATTCTAACCGGAACGAGGAAGACCTGAAAGAAGGGATTTCCCTACTTGGGTATCTGATTCTTACTAAGGTGGTTGAATCTTTGGCTCAGAGACATTGGTTCTTTGAGTCAAGGAGATCAGGGATGAAAATGAGATCAGCTCTGATGGTGGCAGTCTATGAAAAGCAGTTAAAGCTTTCGAATTCAGCCAGGAGAAGACACTCAACTGGGGAAATTGTGAATTACATAGCAGTTGATGCCTATAGAATGGGAGAATTTCCATGGTGGCTTCATTCAACATGGGCTTATGCATTGcagatttttctattaattggTGTCCTTTTTGGTGTTGTGGGTCTAGGTGCTTTACCTGGTTTAGTCCCTATGCTTGTCTGTGGGTTTCTCAATTTACCATTTGCAAAGATCTTACAAAAATGTCAGGCAGAATTTATGACTGCCCAAGATGAACGTCTGAGATCAACTTCAGAGATCCTAAATagtatgaaaattataaagttacaGTCTTGGGAAGATAAATTCAAGAGCTTGGTTGAATCcttaagggaaaaagagttcAAGTGGTTGGCTAATGCACAATTCATGAAAGCTTATggaacatttatttattggatGTCTCCTACCATCATTTCTTCAGTTATTTTCCTGGGGTGTGCAATCTTTCGTAGTGTCCCATTGGATGCTGGAACCATCTTCACAGTTCTTGCAACACTGAGGAACATGTCAGAACCTGTTAGATTTATTCCAGAGGCCCTTTCAGCTATCATCCAAGCTAAGGTCTCCTTTGATCGTCTGACTGCCTTTTTGCTTGACaatgagttaaaaaataatggtatTAGAATTGGAAAGCAAAATCCAGTTTACAGCATTGAAATTCAAGCTGGCAACTTCGGTTGGGATAAGGAATCAGTCTCCCCAACTTTAAGAGATGTGAATTTAGAAGTCAAACGGGGCCAGAAAATTGCAGTTTGTGGGCCAGTAGGAGCTGGAAAATCATCATTCTTAAATGCTATACTGGGAGAGATACCCAAACTTTCAGGAACTGTCAATGTAAGAGGAACCATTGCCTAtgtttctcaaacttcttggaTTCAAAGTGGGACAGTTCGTGATAATATACTATTTGGAAAGCCATTGGACGATATAACCAGATATGAGAATGCCATTAAAGCTTGTGCCTTGGATAAGGATATTAGTGGTTTTAGCCATGGAGATCTTACAGAAATAGGCCAGCGAGGTATTAACATGAGTGGTGGACAAAAACAAAGGATTCAACTTGCTCGAGCAGTCTATAATGATGCAGATATTTATCTCCTTGACGACCCTTTCAGTGCAGTGGATGCACATACTGCTGCCATTCTGTTCAATGACTGTGTCATGACTGCtctaagaaagaaaacagtcATTCTAGTGACTCATCAAGTGGAGCTTCTCTCAGAAGTTGATAAAATCTtgGTAATGGAGGAAGGAAAGACTACTCAATCAGGTAGTTATGAAGATCTCTTGACAGCTGGGACAACCTTTGAACAACTTGTGACTGCTCATAGCAATTCAAGTAAAGAAAACCAAGGGGAATCAGAAAATGTAGTTAAGGTTGTGCCGGTGCAGTCTCGTGGTTTTCATCTTACTACAAATAGAACTGAGGGGGATATTTGTACCGAGGGTCAACCTGGGATACAACTCActcaagaagaaaacaaggagACTGGTGATGTTGGATGGAAGCCATTTTGGGATTACATTTTCATCTCCAAGGGATCACTGTTTCTGTTATTGAACTTGCTAACACAATCAGCTTTCATCGCTTTACAGGCTGCATCTACATTTTGGCTTGCTATTGCCATTGATATGCCAAAAGTAACTAGTGGCATCTTGATTGGGGTCTACACAGTGGTTTCATTTCTTAGTGCTGTCTTTGTATACCTTAGGTCTTTCACTGCTGCTCATCTTGGACTAAAAGCATCTAAATCCTTCTTCTCTAGCTTCACCAATTCTATCTTCAATGCTCCAATGGTGTTCTTCGACTCAACCCCCGTGGGCCGGATTTTAACCAGAGCTTCCTCAGATATGAGTATTTTGGATCTTGATATACCTTTCACCATTAGCTCTGTAACTGCTACAGTAATTGAAGTTCTGGCAATGATTGGGATAATGGCCTCAGTCACATGGCAAGTCCTCATTGTAGCTGTTCCTTCTATGGTGGCTTCAAAGTACCTTCAgGGCTATTATCAAGCCTCTGCAAGGGAAATAATAAGGATAAATGGAACCACCAAAGCTCCAGTTATGAATTTTGCGGCTGAAACATCACTTGGAGTGGTGACTGTGAGAGCTTTTAACATGGTAGACAGATTCTTTCAAAACTATCTAAAGCTGGTAGACAAAGACGCAACCATGTTCTTTCATTCTAATGCTGTCATGGAATGGTTGGCCTTAAGGATTGAAATACTCCAGAATTTGACCCTCTTCACTGcagctttattttttgtttttcttccaaagGGATACGTGCCCTCTGGCTTTGTGGGACTTTCTTTGTCTTATGCATTCTCACTTACATGGATCCAAGTCTTTTTGACTCGATGTTTCTGCAGCTTATCAAACTTTATCATTTCTGTTGAGAGAATCAAACAATTCATTCACATACCAGAAGAGCCTCCTGCAATCGTGAGAGACAATAGGCCACCATCTTCTTGGCCTTCCAAGGGTAGGATAGATCTGAAGGACCTTCAGATTAGATATCGTCCAAATGCTCCCTTGGTACTTAAGGGCATCACTTGTACTTTCAAAGAAGGGAACCGCGTTGGAGTTGTAGGAAGGACTGGTAGTGGAAAAACAACACTTATAAGTGCTTTGTTTCGCTTGGTTGAGCCTGCAGCAGGGGAGATTCTTATTGATGGACTTAACATATGCTCAATGGGACTCAAGGACTTGAGGATGAAACTAAGTATCATTCCTCAAGAACCAACTCTTTTCAGGGGAAGCATTAGAACCAACATGGACCCTCTTGGTTTGTACTCTGATGAGGAAATATGGAAGGCTTTAGAGAAATGTCAGCTCAAGGCTACAATTAGCAGTCTACCACATCTGTTGGACTCTTCTGTGAATGATGAAGGTGAAAATTGGAGCGTTGGACAACGCCAACTCTTCTGTCTTGGAAGAGTGCTCCTTAAGAGGAATAGAATCCTCGTTCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGCTATCGTACAACGAGTTATCAGACAAGAATTCTCAGAATGCACAGTCATTACTGTGGCTCATAGAGTTCCAACTGTTATAGATAGTGACATGGTCATGGTCCTGTCTGATGGGAAACTAGTGGAATATGATGAGACTTCAAAGCTTATGGAGACCAACTCTTCCTTCTCTAAACTGGTATCTGAATATTGGTCCAGCTGCAAGAAGAATTCTTCtcaaaatta 4370 0.3854 MPFFQTTTGEFSWACLSDFHFTSFCTQRSIINIVNLLFLSVFYMSLLVRLISRNTSTESQRKGWLSTVVSICCALVSILYFTYGLWNLIAKRDDIEQSSWLVCMIKGLIWISLTASLLVQRPKWIRILNSLWWAFSFIFVSSINLETLFKDHRIQLFDIIQWPIHFLLLLCALQSYGYFVSKQTPNGSLSEPLLDQKVENKQSRLGQASFLSKLTFSWINPLLSLGYLKPLSLEDIPSLVSEDEANLAYQKFSHSWNLLSRERCTKNLVLWSLIRVHWKENVFIAICAFLRTISVVASPLLLYAFVNYSNRNEEDLKEGISLLGYLILTKVVESLAQRHWFFESRRSGMKMRSALMVAVYEKQLKLSNSARRRHSTGEIVNYIAVDAYRMGEFPWWLHSTWAYALQIFLLIGVLFGVVGLGALPGLVPMLVCGFLNLPFAKILQKCQAEFMTAQDERLRSTSEILNSMKIIKLQSWEDKFKSLVESLREKEFKWLANAQFMKAYGTFIYWMSPTIISSVIFLGCAIFRSVPLDAGTIFTVLATLRNMSEPVRFIPEALSAIIQAKVSFDRLTAFLLDNELKNNGIRIGKQNPVYSIEIQAGNFGWDKESVSPTLRDVNLEVKRGQKIAVCGPVGAGKSSFLNAILGEIPKLSGTVNVRGTIAYVSQTSWIQSGTVRDNILFGKPLDDITRYENAIKACALDKDISGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALRKKTVILVTHQVELLSEVDKILVMEEGKTTQSGSYEDLLTAGTTFEQLVTAHSNSSKENQGESENVVKVVPVQSRGFHLTTNRTEGDICTEGQPGIQLTQEENKETGDVGWKPFWDYIFISKGSLFLLLNLLTQSAFIALQAASTFWLAIAIDMPKVTSGILIGVYTVVSFLSAVFVYLRSFTAAHLGLKASKSFFSSFTNSIFNAPMVFFDSTPVGRILTRASSDMSILDLDIPFTISSVTATVIEVLAMIGIMASVTWQVLIVAVPSMVASKYLQGYYQASAREIIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFQNYLKLVDKDATMFFHSNAVMEWLALRIEILQNLTLFTAALFFVFLPKGYVPSGFVGLSLSYAFSLTWIQVFLTRCFCSLSNFIISVERIKQFIHIPEEPPAIVRDNRPPSSWPSKGRIDLKDLQIRYRPNAPLVLKGITCTFKEGNRVGVVGRTGSGKTTLISALFRLVEPAAGEILIDGLNICSMGLKDLRMKLSIIPQEPTLFRGSIRTNMDPLGLYSDEEIWKALEKCQLKATISSLPHLLDSSVNDEGENWSVGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAIVQRVIRQEFSECTVITVAHRVPTVIDSDMVMVLSDGKLVEYDETSKLMETNSSFSKLVSEYWSSCKKNSSQN 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02458 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 819 IPR027417 -
Bva03g02458 1456 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 58 1453 - -
Bva03g02458 1456 CDD ABC_6TM_ABCC_D1 283 571 IPR044746 GO:0140359
Bva03g02458 1456 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 897 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02458 1456 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 58 1453 - -
Bva03g02458 1456 CDD ABCC_MRP_domain1 596 797 - -
Bva03g02458 1456 Pfam ABC transporter 1227 1375 IPR003439 GO:0005524
Bva03g02458 1456 SUPERFAMILY ABC transporter transmembrane region 270 571 IPR036640 GO:0005524|GO:0016021
Bva03g02458 1456 Gene3D - 578 842 IPR027417 -
Bva03g02458 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 598 820 IPR003439 GO:0005524
Bva03g02458 1456 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524
Bva03g02458 1456 Gene3D ABC transporter type 1, transmembrane domain 262 577 IPR036640 GO:0005524|GO:0016021
Bva03g02458 1456 Gene3D ABC transporter type 1, transmembrane domain 862 1191 IPR036640 GO:0005524|GO:0016021
Bva03g02458 1456 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 282 563 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02458 1456 CDD ABCC_MRP_domain2 1208 1426 - -
Bva03g02458 1456 Pfam ABC transporter transmembrane region 283 543 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02458 1456 Pfam ABC transporter transmembrane region 926 1137 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva03g02458 1456 Pfam ABC transporter 614 749 IPR003439 GO:0005524
Bva03g02458 1456 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1210 1444 IPR003439 GO:0005524
Bva03g02458 1456 Gene3D - 1193 1444 IPR027417 -
Bva03g02458 1456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1200 1443 IPR027417 -
Bva03g02458 1456 SUPERFAMILY ABC transporter transmembrane region 881 1192 IPR036640 GO:0005524|GO:0016021
Bva03g02458 1456 CDD ABC_6TM_ABCC_D2 905 1185 IPR044726 GO:0140359
Bva03g02458 1456 SMART AAA_5 623 797 IPR003593 -
Bva03g02458 1456 SMART AAA_5 1236 1428 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02458 Bva-Chr3 20818714 20826205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02458 596 828 Calmodulin-binding Proteins AT2G36910 26.953 2.13e-21 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02458 - - gmx:100784827 2067.74