Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02454 ATGGAAAACAAACAATCTTATGATTTCcatcaagaatcatctactAATGATTCATGGCTTTCCCCTAGCttccaaaccctaaacctatcTTCTGtcattgcttcttcttcttcttttatccaagaaaaccaaaaatctCGAGTTTCCGTTGAGTTATCACTTTCAAATTCAACCAGCTACTATGATGATGACCAAAACAAAGTCAAACCCTCTCTTGCACCGAACAAGAGGAAATCATGCCCTAACTCTTCCATGAAAGAGACCAAGAGGATGCGTGGAGGTCAGAAAAACCTAGAAGAGATGAAGTCATGGGGTTATGATTTAAAGCTTTATGAAGATCCATGGAAAATCAAGAAAGTACTCACTCAAAGTGATCTTGGCAAATTAAGCAGACTCTTGTTGGCCACTGATTTGGTTGAAAAATTTATGCTACCAGTCTTGGGTGTTGATGCACAAAGAGATACTAAAAAGCTTGAGAGGGGAACCCAAATCAAGTTGTGGGACGTGGACACTGAAACCATGCACTATCTGATTCTGAAGAAGTGGGTTTCTTCCAAAAGTTATGTTTTGATCGGAAGCtggaaaaaagattttgtcaAGAGAAGATGCTTGAAGAAGGGAGATGAAATTGGACTTCTTTGGGATCCTTACAAGCACCactttgttttctctattATTAAGTATGCCta 689 0.3338 MENKQSYDFHQESSTNDSWLSPSFQTLNLSSVIASSSSFIQENQKSRVSVELSLSNSTSYYDDDQNKVKPSLAPNKRKSCPNSSMKETKRMRGGQKNLEEMKSWGYDLKLYEDPWKIKKVLTQSDLGKLSRLLLATDLVEKFMLPVLGVDAQRDTKKLERGTQIKLWDVDTETMHYLILKKWVSSKSYVLIGSWKKDFVKRRCLKKGDEIGLLWDPYKHHFVFSIIKYA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02454 229 CDD B3_DNA 115 227 IPR003340 GO:0003677
Bva03g02454 229 SUPERFAMILY DNA-binding pseudobarrel domain 114 225 IPR015300 -
Bva03g02454 229 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 40 227 - -
Bva03g02454 229 MobiDBLite consensus disorder prediction 1 22 - -
Bva03g02454 229 Gene3D - 114 227 IPR015300 -
Bva03g02454 229 MobiDBLite consensus disorder prediction 61 94 - -
Bva03g02454 229 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 40 227 - -
Bva03g02454 229 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02454 Bva-Chr3 20798168 20798857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02454 94 210 B3 DNA Binding Superfamily AT1G25560 32.203 1.74e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02454 - - gmx:102670334 172.94