Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02447 ATGCCGCTTTATGTAGCGCACACACGGTCGagcaagttcttccatttcagCGGTGACCTTGTTTCACGAAAGATTGTAGCTGGGATTCTTCAAATATTCTCACCCCTTCCATTTCAGGCTATGGACACATCAAATCCTGCTCCATTTGTGAATGCACAGATACTACCCAATTATGTTGGAAGGAAAGTGCGATTGGTGGTTCAAGTTAACCGATCTGATGGTGGTGGAGTAACAACAGCAACATCCACGGATGACCATCAACTAACCATAAAAGAGTTGCCACCAGTCCCTCCTATGAATTATGTTGAGGTCATTGGTATTGCTGAAACTGACCAGTCGGTTAATGCCGAAATATGGACTGACTTTGGCACCACATTTGACACCAAGTCCTACAACCAGTTATGCCAGTTAGCAAATGGAGAATTCAGAAGTCTATTTCTTTA 443 0.4176 MPLYVAHTRSSKFFHFSGDLVSRKIVAGILQIFSPLPFQAMDTSNPAPFVNAQILPNYVGRKVRLVVQVNRSDGGGVTTATSTDDHQLTIKELPPVPPMNYVEVIGIAETDQSVNAEIWTDFGTTFDTKSYNQLCQLANGEFRSLFL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02447 147 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 41 147 - -
Bva03g02447 147 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 41 147 - -
Bva03g02447 147 Pfam Replication factor A protein 3 41 140 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bva03g02447 147 CDD RPA3 46 146 - -
Bva03g02447 147 Gene3D - 40 147 IPR012340 -
Bva03g02447 147 SUPERFAMILY Nucleic acid-binding proteins 45 146 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02447 Bva-Chr3 20763259 20767436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02447 41 147 Core DNA Replication Machinery Family AT4G18590 57.944 8.56e-42 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02447 K10740 - gmx:100781484 164.081