Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02444 ATGGGTTCAGAACCTCTTCTTCCAAAATGGGCATCGAAACCTTGCATCATGGGAATTGATGAAGCTGGACGAGGTCCCGTTTTAGGGCCAATGGTGTACGGATGCTTATACTGTGCTAGCTCTTATCAGAAAACCCTTGCAAGTTTGAGTTTTGCAGATTCTAAGAcactaaaagaagaaaagagggaagAACTATTTCAAAGTTTGAAGGCCAATGAATCAATTGGATGGGCTGTTGACATCTTGGACCCAAGGGAAATCTCGGCTAAAATGCTGAAGAAGGAGAAGATAAACCTGAATGAGATATCACATGACTCTGCCATGGGCCTGATTGATAGGGTTTTGAAAATGGGAGTTCTTCTAACTGAGGTTTTTTTGGATACAGTTGGTGATGCAGAGAAATACGAAACAAAACTTTCTAAACATTTTCCTTCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTGAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGACCGGGCATTGCAGAACTGGGTGCTTGATGAGACCGCTGAAAACATGCATACAAACTATGGCTCTGGATATCCTGGAGATCCCCAAACGAAGTCCTGGCTGGAGCATCACAAACATAATGTATTTGGATTCCCAACATTGGTCCGATTCAGTTGGGGAACCTGCAATGCATACTCTAAAGATATTGAGGAAGTCATATGGGAATCTGATAAAACAGATGAAGAGGGTGGAAGCAATAGTAGGGGTGTGAAGAGgcaattaaaattaagcaGTGTAGGTTTCACTACATCCAAGAGGAGAAGTGAAGAAATAGAATCAAGTGGTAAAGGACGCTGCAAATTTTTCCAGGCTCGGAAACTTGAGCACGTGACTTCTTTCTG 896 0.4074 MGSEPLLPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCASSYQKTLASLSFADSKTLKEEKREELFQSLKANESIGWAVDILDPREISAKMLKKEKINLNEISHDSAMGLIDRVLKMGVLLTEVFLDTVGDAEKYETKLSKHFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALQNWVLDETAENMHTNYGSGYPGDPQTKSWLEHHKHNVFGFPTLVRFSWGTCNAYSKDIEEVIWESDKTDEEGGSNSRGVKRQLKLSSVGFTTSKRRSEEIESSGKGRCKFFQARKLEHVTSF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02444 298 CDD RNase_HII_eukaryota_like 17 228 - -
Bva03g02444 298 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Bva03g02444 298 Gene3D Ribonuclease hii. Domain 2 187 233 IPR023160 GO:0004523
Bva03g02444 298 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bva03g02444 298 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Bva03g02444 298 Gene3D - 3 186 IPR036397 GO:0003676
Bva03g02444 298 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 298 IPR001352 GO:0003723|GO:0004523
Bva03g02444 298 PANTHER RIBONUCLEASE 7 298 - -
Bva03g02444 298 TIGRFAM TIGR00729: ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02444 Bva-Chr3 20748856 20752505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02444 1 298 Core DNA Replication Machinery Family AT2G25100 66.107 1.90e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02444 K10743 - nnu:104589003 510.76